RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 UBE2Q2Q8WVN8 375 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
CTNNA1-223ENST00000520520 TMEM88BA6NKF7 163 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 PRKCSHP14314 528 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 MYL6BP14649 208 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 GPTP24298 496 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 EPHX2P34913 555 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 VEGFBP49765 207 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 CSPP1Q1MSJ5 1256 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 CAVIN1Q6NZI2 390 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 SLC4A10Q6U841 1118 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 CLEC4GQ6UXB4 293 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 SLC51AQ86UW1 340 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 SYNE4Q8N205 404 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 IL17RAQ96F46 866 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 HDAC5Q9UQL6 1122 aa10.38□□□□□ -0.75
CTNNA1-223ENST00000520520 SCN4AP35499 1836 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 FKBP5Q13451 457 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 HSP90AB4PQ58FF6 505 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 RTKN2Q8IZC4 609 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 LMBRD1Q9NUN5 540 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 CCDC39Q9UFE4 941 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 STAP2Q9UGK3 403 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
CTNNA1-223ENST00000520520 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 APBB1O00213 710 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 LBX1P52954 281 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 FLIIQ13045 1269 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 CUL4AQ13619 759 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 GAS2L3Q86XJ1 694 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 CNTROBQ8N137 903 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 RPGRQ92834 1020 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 ZBTB3Q9H5J0 574 aa10.36□□□□□ -0.75
CTNNA1-223ENST00000520520 SALL3Q9BXA9 1300 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 SMARCA5O60264 1052 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 LETM1O95202 739 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 HOXB7P09629 217 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 UBTFL1P0CB47 393 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 CTCFP49711 727 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 NEK4P51957 841 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 ATP8B2P98198 1209 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.751e-6■■■□□ 15.7
CTNNA1-223ENST00000520520 TAF7Q15545 349 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 KIF6Q6ZMV9 814 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 TTLL7Q6ZT98 887 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 GPATCH3Q96I76 525 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 ANO2Q9NQ90 1003 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 ATP6V1DQ9Y5K8 247 aa10.35□□□□□ -0.75
CTNNA1-223ENST00000520520 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 EIF6P56537 245 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 HSP90AA2PQ14568 343 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 DEFB115Q30KQ5 88 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 LARGE2Q8N3Y3 721 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 MAP7D2Q96T17 732 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 NYXQ9GZU5 481 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 KDM3BQ7LBC6 1761 aa10.34□□□□□ -0.75
CTNNA1-223ENST00000520520 KLRG2A4D1S0 409 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 FZD9O00144 591 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 OFD1O75665 1012 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 BRD1O95696 1058 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 CHMLP26374 656 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 KRT24Q2M2I5 525 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 GPC2Q8N158 579 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 PDLIM2Q96JY6 352 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 TSPY26PQ9H489 355 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 COL4A5P29400 1685 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 NUP98P52948 1817 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 ERBB4Q15303 1308 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
CTNNA1-223ENST00000520520 TRAF5O00463 557 aa10.32□□□□□ -0.76
CTNNA1-223ENST00000520520 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-223ENST00000520520 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-223ENST00000520520 EPS15P42566 896 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms