RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 LAMB2P55268 1798 aa12.73□□□□□ -0.37
TRPS1-210ENST00000519815 MYH3P11055 1940 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 KLRG2A4D1S0 409 aaPredicted RBP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 PUM3Q15397 648 aaKnown RBP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 ATP2B3Q16720 1220 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 GORABQ5T7V8 394 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
TRPS1-210ENST00000519815 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
TRPS1-210ENST00000519815 ZNF609O15014 1411 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 CHRNDQ07001 517 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 GRAPQ13588 217 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.37
TRPS1-210ENST00000519815 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
TRPS1-210ENST00000519815 LPIN2Q92539 896 aa12.71□□□□□ -0.37
TRPS1-210ENST00000519815 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
TRPS1-210ENST00000519815 SLC5A1P13866 664 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 FGFR2P21802 821 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
TRPS1-210ENST00000519815 PDE6BP35913 854 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 EVI5LQ96CN4 794 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 XAGE2Q96GT9 111 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 ANKRD2Q9GZV1 360 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 LRP5O75197 1615 aa12.7□□□□□ -0.38
TRPS1-210ENST00000519815 MAP3K13O43283 966 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 TAF5LO75529 589 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 BBOX1O75936 387 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 MAP4K4O95819 1239 aaPredicted RBP12.69□□□□□ -0.38
TRPS1-210ENST00000519815 ADORA1P30542 326 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRPS1-210ENST00000519815 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 HAUS7Q99871 368 aa12.69□□□□□ -0.38
TRPS1-210ENST00000519815 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
TRPS1-210ENST00000519815 SEC24BO95487 1268 aa12.68□□□□□ -0.38
TRPS1-210ENST00000519815 NPR1P16066 1061 aa12.68□□□□□ -0.38
TRPS1-210ENST00000519815 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
TRPS1-210ENST00000519815 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
TRPS1-210ENST00000519815 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
TRPS1-210ENST00000519815 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
TRPS1-210ENST00000519815 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
TRPS1-210ENST00000519815 QSER1Q2KHR3 1735 aa12.68□□□□□ -0.38
TRPS1-210ENST00000519815 CHMLP26374 656 aa12.67□□□□□ -0.38
TRPS1-210ENST00000519815 TMC4Q7Z404 712 aa12.67□□□□□ -0.38
TRPS1-210ENST00000519815 ZNF512BQ96KM6 892 aaPredicted RBP12.67□□□□□ -0.38
TRPS1-210ENST00000519815 HIP1O00291 1037 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 SRGNP10124 158 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 CCDC102BQ68D86 513 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 MASTLQ96GX5 879 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
TRPS1-210ENST00000519815 NRXN2Q9P2S2 1712 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 TNRC6CQ9HCJ0 1690 aaKnown RBP12.65□□□□□ -0.38
TRPS1-210ENST00000519815 H0YIN7 160 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 SNAP23O00161 211 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 KCNJ4P48050 445 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.38
TRPS1-210ENST00000519815 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
TRPS1-210ENST00000519815 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
TRPS1-210ENST00000519815 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
TRPS1-210ENST00000519815 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 LEMD3Q9Y2U8 911 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 COL4A1P02462 1669 aa12.64□□□□□ -0.39
TRPS1-210ENST00000519815 XDHP47989 1333 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 GOLIM4O00461 696 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 REC8O95072 547 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 PHKA1P46020 1223 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 BCAMP50895 628 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 R3HDM1Q15032 1099 aaKnown RBP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
TRPS1-210ENST00000519815 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
TRPS1-210ENST00000519815 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
TRPS1-210ENST00000519815 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
TRPS1-210ENST00000519815 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
TRPS1-210ENST00000519815 POLD1P28340 1107 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms