RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
TTC1-202ENST00000518560 IARSP41252 1262 aaKnown RBP12.53□□□□□ -0.4
TTC1-202ENST00000518560 DNAJC5GQ8N7S2 189 aa12.53□□□□□ -0.4
TTC1-202ENST00000518560 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
TTC1-202ENST00000518560 ABCC4O15439 1325 aa12.53□□□□□ -0.4
TTC1-202ENST00000518560 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
TTC1-202ENST00000518560 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
TTC1-202ENST00000518560 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
TTC1-202ENST00000518560 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
TTC1-202ENST00000518560 RTKN2Q8IZC4 609 aa12.52□□□□□ -0.41
TTC1-202ENST00000518560 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
TTC1-202ENST00000518560 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
TTC1-202ENST00000518560 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
TTC1-202ENST00000518560 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 SMAPO00193 183 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 HOXB7P09629 217 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
TTC1-202ENST00000518560 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
TTC1-202ENST00000518560 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 NLRP3Q96P20 1036 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
TTC1-202ENST00000518560 DBF4Q9UBU7 674 aaPredicted RBP12.51□□□□□ -0.41
TTC1-202ENST00000518560 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
TTC1-202ENST00000518560 GNAI1P63096 354 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 PSMD1Q99460 953 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
TTC1-202ENST00000518560 AOC3Q16853 763 aa12.49□□□□□ -0.41
TTC1-202ENST00000518560 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
TTC1-202ENST00000518560 TAF1DQ9H5J8 278 aaPredicted RBP12.49□□□□□ -0.41
TTC1-202ENST00000518560 FZD9O00144 591 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 RNF40O75150 1001 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 GGCXP38435 758 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 PRSS12P56730 875 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
TTC1-202ENST00000518560 LARGE2Q8N3Y3 721 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 KLRG1Q96E93 195 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 MRS2Q9HD23 443 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
TTC1-202ENST00000518560 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
TTC1-202ENST00000518560 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
TTC1-202ENST00000518560 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
TTC1-202ENST00000518560 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
TTC1-202ENST00000518560 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
TTC1-202ENST00000518560 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
TTC1-202ENST00000518560 MYH3P11055 1940 aa12.47□□□□□ -0.41
TTC1-202ENST00000518560 EPHX2P34913 555 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 GRAPQ13588 217 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
TTC1-202ENST00000518560 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 TATDN2Q93075 761 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 MYD88Q99836 296 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 HACL1Q9UJ83 578 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
TTC1-202ENST00000518560 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
TTC1-202ENST00000518560 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
TTC1-202ENST00000518560 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
TTC1-202ENST00000518560 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
TTC1-202ENST00000518560 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
TTC1-202ENST00000518560 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
TTC1-202ENST00000518560 EPS15P42566 896 aa12.44□□□□□ -0.42
TTC1-202ENST00000518560 SCNN1DP51172 638 aa12.44□□□□□ -0.42
TTC1-202ENST00000518560 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
TTC1-202ENST00000518560 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
TTC1-202ENST00000518560 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
TTC1-202ENST00000518560 GPC2Q8N158 579 aa12.44□□□□□ -0.42
TTC1-202ENST00000518560 SCN9AQ15858 1988 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
TTC1-202ENST00000518560 ANP32CO43423 234 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 MAP1SQ66K74 1059 aaPredicted RBP12.43□□□□□ -0.42
TTC1-202ENST00000518560 G2E3Q7L622 706 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 SP8Q8IXZ3 490 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 MPNDQ8N594 471 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 JMYQ8N9B5 988 aa12.43□□□□□ -0.42
TTC1-202ENST00000518560 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
TTC1-202ENST00000518560 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
TTC1-202ENST00000518560 TRPM7Q96QT4 1865 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 PASKQ96RG2 1323 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
TTC1-202ENST00000518560 BBOX1O75936 387 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
TTC1-202ENST00000518560 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
TTC1-202ENST00000518560 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 CCDC30Q5VVM6 783 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 RTFDC1Q9BY42 306 aaPredicted RBP12.42□□□□□ -0.42
TTC1-202ENST00000518560 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
TTC1-202ENST00000518560 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
TTC1-202ENST00000518560 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms