RNA–Protein interactions for RNA: ENST00000518495.5

VDAC3-202, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-202ENST00000518495 IRX2Q9BZI1 471 aaPredicted RBP6.25□□□□□ -1.41
VDAC3-202ENST00000518495 LGR6Q9HBX8 967 aa6.25□□□□□ -1.41
VDAC3-202ENST00000518495 HOMER2Q9NSB8 354 aa6.25□□□□□ -1.41
VDAC3-202ENST00000518495 MKRN1Q9UHC7 482 aaKnown RBP6.25□□□□□ -1.41
VDAC3-202ENST00000518495 PCDHB11Q9Y5F2 797 aa6.25□□□□□ -1.41
VDAC3-202ENST00000518495 MAFBQ9Y5Q3 323 aaPredicted RBP6.25□□□□□ -1.41
VDAC3-202ENST00000518495 EMILIN1Q9Y6C2 1016 aa6.25□□□□□ -1.41
VDAC3-202ENST00000518495 ZCCHC6Q5VYS8 1495 aaKnown RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 DYTNA2CJ06 578 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 TRIM64CA6NLI5 447 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 K7ELQ4 463 aaPredicted RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 CHL1O00533 1208 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ATP9BO43861 1147 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ORC4O43929 436 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 DGAT1O75907 488 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 BPNT1O95861 308 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 IGHDP01880 384 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ZNF76P36508 570 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 EXOSC10Q01780 885 aaKnown RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 IFT88Q13099 833 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 SEPT2Q15019 361 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 LONRF1Q17RB8 773 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 CCDC158Q5M9N0 1113 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ACBD5Q5T8D3 534 aaPredicted RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 TAS1R3Q7RTX0 852 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 RELL1Q8IUW5 271 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ARL6IP6Q8N6S5 226 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 FBXO41Q8TF61 875 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 ATRIPQ8WXE1 791 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 RPGRQ92834 1020 aaKnown RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 PAWRQ96IZ0 340 aaKnown RBP6.24□□□□□ -1.41
VDAC3-202ENST00000518495 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 MAFFQ9ULX9 164 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 PPP2R3BQ9Y5P8 575 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 IKBKGQ9Y6K9 419 aa6.24□□□□□ -1.41
VDAC3-202ENST00000518495 SLC26A4O43511 780 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 DIAPH1O60610 1272 aaKnown RBP6.23□□□□□ -1.41
VDAC3-202ENST00000518495 NBPF7P0C2Y1 421 aaPredicted RBP6.23□□□□□ -1.41
VDAC3-202ENST00000518495 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
VDAC3-202ENST00000518495 WDR4P57081 412 aaKnown RBP6.23□□□□□ -1.41
VDAC3-202ENST00000518495 GRAMD1BQ3KR37 738 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 PKDCCQ504Y2 493 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 HYIQ5T013 277 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 LDLRAD1Q5T700 205 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 TRAF7Q6Q0C0 670 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 DAAM2Q86T65 1068 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 BRSK2Q8IWQ3 736 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 ACRBPQ8NEB7 543 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 TRIM52Q96A61 297 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 CCDC34Q96HJ3 373 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 EGFL7Q9UHF1 273 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 PGAP2Q9UHJ9 254 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 SLC45A1Q9Y2W3 748 aa6.23□□□□□ -1.41
VDAC3-202ENST00000518495 RAD54L2Q9Y4B4 1467 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 USP17L5A8MUK1 530 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 PRRT4C9JH25 899 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TNFRSF10BO14763 440 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TSPAN6O43657 245 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 ZIC2O95409 532 aaPredicted RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 AVPP01185 164 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TIMP2P16035 220 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 RRM1P23921 792 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 MAPK1P28482 360 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TRPC1P48995 793 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 FANCCQ00597 558 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 USP4Q13107 963 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TRIM29Q14134 588 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 MORC3Q14149 939 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 DEPDC4Q8N2C3 294 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 ZNF784Q8NCA9 323 aaPredicted RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 PPHLN1Q8NEY8 458 aaKnown RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 ITPKCQ96DU7 683 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 TMEM63CQ9P1W3 806 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 EVLQ9UI08 416 aaPredicted RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 HDAC9Q9UKV0 1011 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 INTUQ9ULD6 942 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 MKL2Q9ULH7 1088 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 GTF2A1LQ9UNN4 478 aa6.22□□□□□ -1.41
VDAC3-202ENST00000518495 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 MRPS23Q9Y3D9 190 aaKnown RBP6.22□□□□□ -1.41
VDAC3-202ENST00000518495 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 GOLGA6L3A6NEY3 463 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 CTAGE5O15320 804 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 LILRA1O75019 489 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 CCDC175P0C221 793 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 NAT1P18440 290 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 TSPAN7P41732 249 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 SCTRP47872 440 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 EPHB1P54762 984 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 GEMIN4P57678 1058 aaKnown RBP6.21□□□□□ -1.42
VDAC3-202ENST00000518495 ERVK-9P63128 1117 aa6.21□□□□□ -1.42
VDAC3-202ENST00000518495 NCOA4Q13772 614 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms