RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 FHDC1Q9C0D6 1143 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 DNAJC5Q9H3Z4 198 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ARHGEF10LQ9HCE6 1279 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LRRC4CQ9HCJ2 640 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 VAV3Q9UKW4 847 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PCDHGC3Q9UN70 934 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CNTNAP2Q9UHC6 1331 aa0.32□□□□□ -2.36
RNU6-1238P-201ENST00000517215 A0A0A6YYK5 440 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FAM170BA6NMN3 283 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CBSLP0DN79 551 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CDK4P11802 303 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ADMP35318 185 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CBSP35520 551 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PLA2G4AP47712 749 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RAB15P59190 212 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ERVK-9P63128 1117 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PRKCQQ04759 706 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TBC1D8BQ0IIM8 1120 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SETDB1Q15047 1291 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 NKX1-1Q15270 411 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ARSJQ5FYB0 599 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PAOXQ6QHF9 649 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CRELD2Q6UXH1 353 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KIAA1211Q6ZU35 1233 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CYFIP1Q7L576 1253 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RAB44Q7Z6P3 723 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SEPT12Q8IYM1 358 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 GATA6Q92908 595 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CNKSR1Q969H4 720 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 DACT3Q96B18 629 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 WBP1Q96G27 269 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 C8orf49Q96NF6 230 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TBC1D32Q96NH3 1257 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LPIN3Q9BQK8 851 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ARHGAP9Q9BRR9 750 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TSC22D4Q9Y3Q8 395 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 GJA3Q9Y6H8 435 aa0.31□□□□□ -2.36
RNU6-1238P-201ENST00000517215 A0A087X1B8 175 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FAM95CA0A1B0GW59 222 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 GAS2O43903 313 aaKnown RBP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 IL2RAP01589 272 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZNF76P36508 570 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CD96P40200 585 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CEBPAP49715 358 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 MTMR2Q13614 643 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FKBP8Q14318 412 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SSPNQ14714 243 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KRT71Q3SY84 523 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KLHL22Q53GT1 634 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SGO2Q562F6 1265 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CC2D2BQ6DHV5 1058 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CADPS2Q86UW7 1296 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KISS1RQ969F8 398 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 BBC3Q96PG8 261 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RBM15Q96T37 977 aaKnown RBP eCLIP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PRDM7Q9NQW5 492 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 DNAJB12Q9NXW2 375 aaKnown RBP0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PRKAG2Q9UGJ0 569 aa0.3□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LOC100289279A0A1B0GTE1 492 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RGL2O15211 777 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TRAK2O60296 914 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PEX10O60683 326 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 GNRH1P01148 92 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TATP17735 454 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PI3P19957 117 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RXRBP28702 533 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KCNQ4P56696 695 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PLAURQ03405 335 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 SFSWAPQ12872 951 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CDSNQ15517 529 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PCSK7Q16549 785 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 VMACQ2NL98 169 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 NBPF1Q3BBV0 1214 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PERM1Q5SV97 790 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PPP2R2DQ66LE6 453 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PDXDC2PQ6P474 469 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 LARP1Q6PKG0 1096 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZNF765Q7L2R6 523 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZBTB33Q86T24 672 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 FAM35AQ86V20 835 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PPARGC1BQ86YN6 1023 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CSRNP3Q8WYN3 585 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 HRASLS5Q96KN8 279 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 NECAB3Q96P71 396 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 PPP1R10Q96QC0 940 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 RUSC1Q9BVN2 902 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 KRTAP4-1Q9BYQ7 146 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 MCOLN1Q9GZU1 580 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 EFCC1Q9HA90 598 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 GCM1Q9NP62 436 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZDHHC3Q9NYG2 299 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TESQ9UGI8 421 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ZFR2Q9UPR6 939 aaKnown RBP0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 AHNAK2Q8IVF2 5795 aa0.29□□□□□ -2.36
RNU6-1238P-201ENST00000517215 TEX51A0A1B0GUA7 166 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 NUTM2FA1L443 756 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CPB1P15086 417 aa0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 CD68P34810 354 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1238P-201ENST00000517215 ABHD18Q0P651 414 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms