RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ANKRD7Q92527 254 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 ETAA1Q9NY74 926 aa8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-219ENST00000514743 MAP4K4O95819 1239 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 PHKG2P15735 406 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 RHBDL3P58872 404 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 CCDC181Q5TID7 509 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 AP1ARQ63HQ0 302 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 TRIM74Q86UV6 250 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 TRIM73Q86UV7 250 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 TCHHQ07283 1943 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 NAIF1Q69YI7 327 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 ZNF790Q6PG37 636 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 MTA3Q9BTC8 594 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 DDX41Q9UJV9 622 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 EPB41L2O43491 1005 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 NAT1P18440 290 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 HSPA4P34932 840 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 PSMD2Q13200 908 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 SLC39A6Q13433 755 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 TMX3Q96JJ7 454 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 HYPKQ9NX55 129 aa8.73□□□□□ -1.01
PDLIM5-219ENST00000514743 TOGARAM1Q9Y4F4 1720 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 IGKV5-2P06315 115 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 NEK4P51957 841 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CUL4AQ13619 759 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 SUCLG2Q96I99 432 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 SGSM2O43147 1006 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CAPN15O75808 1086 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 NUCB2P80303 420 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 NOM1Q5C9Z4 860 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 MCTP1Q6DN14 999 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 PA2G4Q9UQ80 394 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 TTC41PQ6P2S7 1318 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CPDO75976 1380 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 KINO60870 393 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CYP2C19P33261 490 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 LINS1Q8NG48 757 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 LSG1Q9H089 658 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-219ENST00000514743 CYP27B1O15528 508 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 SETSIPP0DME0 302 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 IRX1P78414 480 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 ZNF396Q96N95 335 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 LMBRD1Q9NUN5 540 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.011e-6■■■■□ 20.7
PDLIM5-219ENST00000514743 CTNNA3Q9UI47 895 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 STK24Q9Y6E0 443 aa8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 MORC2Q9Y6X9 1032 aaPredicted RBP8.71□□□□□ -1.01
PDLIM5-219ENST00000514743 GRM8O00222 908 aa8.71□□□□□ -1.02
PDLIM5-219ENST00000514743 KLHL40Q2TBA0 621 aa8.71□□□□□ -1.02
PDLIM5-219ENST00000514743 THOC1Q96FV9 657 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-219ENST00000514743 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-219ENST00000514743 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 NEBLO76041 1014 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 SASH1O94885 1247 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 ATF3P18847 181 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 RAPGEF4Q8WZA2 1011 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 EVI5LQ96CN4 794 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 RANBP17Q9H2T7 1088 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 BICC1Q9H694 974 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 SPATA31A3Q5VYP0 1347 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 ANKRD18BA2A2Z9 1011 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 CD151P48509 253 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 ZNF496Q96IT1 587 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 ZNF446Q9NWS9 450 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 KCPQ6ZWJ8 1503 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 MCM2P49736 904 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 WWC2Q6AWC2 1192 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 CNTROBQ8N137 903 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 TMX4Q9H1E5 349 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 CWC15Q9P013 229 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 FRMD4BQ9Y2L6 1034 aa8.7□□□□□ -1.02
PDLIM5-219ENST00000514743 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 FAM163BP0C2L3 166 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 NEFHP12036 1026 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 AIMP1Q12904 312 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 NFXL1Q6ZNB6 911 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 TTC14Q96N46 770 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 ARPC5LQ9BPX5 153 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 UPF3BQ9BZI7 483 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 SNX14Q9Y5W7 946 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms