RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SNRPA1P09661 255 aaKnown RBP4.4□□□□□ -1.7
CHD1-211ENST00000514344 HCLS1P14317 486 aaPredicted RBP4.4□□□□□ -1.7
CHD1-211ENST00000514344 SYN1P17600 705 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 INHBEP58166 350 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 CDCA8Q53HL2 280 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 GPR153Q6NV75 609 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 TTLL7Q6ZT98 887 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.7
CHD1-211ENST00000514344 RRP7AQ9Y3A4 280 aaKnown RBP4.4□□□□□ -1.7
CHD1-211ENST00000514344 NUP98P52948 1817 aa4.4□□□□□ -1.7
CHD1-211ENST00000514344 KDM3BQ7LBC6 1761 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 CFAP54Q96N23 3096 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 GNAT3A8MTJ3 354 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 MYL6BP14649 208 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 DDX46Q7L014 1031 aaKnown RBP4.4□□□□□ -1.71
CHD1-211ENST00000514344 GUCD1Q96NT3 240 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 PTPN18Q99952 460 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 RNF208Q9H0X6 261 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 BIN2Q9UBW5 565 aaPredicted RBP4.4□□□□□ -1.71
CHD1-211ENST00000514344 POLLQ9UGP5 575 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 NCOR1O75376 2440 aa4.4□□□□□ -1.71
CHD1-211ENST00000514344 BDP1A6H8Y1 2624 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 FARP2O94887 1054 aaPredicted RBP4.39□□□□□ -1.71
CHD1-211ENST00000514344 VIL1P09327 827 aaKnown RBP4.39□□□□□ -1.71
CHD1-211ENST00000514344 USP17L8P0C7I0 530 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 OTUD7BQ6GQQ9 843 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 USP34Q70CQ2 3546 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 SASH1O94885 1247 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 GJA8P48165 433 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 MAP3K12Q12852 859 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 ARHGEF6Q15052 776 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 TAF1CQ15572 869 aaPredicted RBP4.39□□□□□ -1.71
CHD1-211ENST00000514344 KIF6Q6ZMV9 814 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 PPP1R42Q7Z4L9 355 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 UBE2Q1Q7Z7E8 422 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 MORC1Q86VD1 984 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 TDHQ8IZJ6 230 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 ZNF579Q8NAF0 562 aaKnown RBP4.39□□□□□ -1.71
CHD1-211ENST00000514344 GDF15Q99988 308 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 ZC3H12CQ9C0D7 883 aaKnown RBP4.39□□□□□ -1.71
CHD1-211ENST00000514344 MAP3K15Q6ZN16 1313 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 REV3LO60673 3130 aa4.39□□□□□ -1.71
CHD1-211ENST00000514344 WNT10BO00744 389 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 ZBTB48P10074 688 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 ZNF280AP59817 542 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 GRAPQ13588 217 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 LRIT3Q3SXY7 679 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 LDLRAD1Q5T700 205 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 RSBN1LQ6PCB5 846 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 NKX2-3Q8TAU0 364 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 GRAPLQ8TC17 118 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 U2AF1L4Q8WU68 220 aaKnown RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 WNK4Q96J92 1243 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 SIPA1L3O60292 1781 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 GJB1P08034 283 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 CCL5P13501 91 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 GPSM2P81274 684 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 MAFAQ8NHW3 353 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 SNX27Q96L92 541 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 MXD3Q9BW11 206 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 ERVV-1B6SEH8 477 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 TNFRSF10AO00220 468 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 GJA5P36382 358 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 MAGEA10P43363 369 aaPredicted RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 SPNS2Q8IVW8 549 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 ZNF34Q8IZ26 560 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 AGBL3Q8NEM8 1001 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 SYMPKQ92797 1274 aaKnown RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 CELF1Q92879 486 aaKnown RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 FBXW7Q969H0 707 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 UTP14AQ9BVJ6 771 aaKnown RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 UBE2OQ9C0C9 1292 aaKnown RBP4.38□□□□□ -1.71
CHD1-211ENST00000514344 SCUBE2Q9NQ36 999 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 MIS18AQ9NYP9 233 aa4.38□□□□□ -1.71
CHD1-211ENST00000514344 GRK4P32298 578 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 LACTBP83111 547 aaPredicted RBP4.37□□□□□ -1.71
CHD1-211ENST00000514344 KIF22Q14807 665 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 OGFOD1Q8N543 542 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 TBC1D16Q8TBP0 767 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 RAET1EQ8TD07 263 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 PAWRQ96IZ0 340 aaKnown RBP4.37□□□□□ -1.71
CHD1-211ENST00000514344 EYA3Q99504 573 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 RIPOR2Q9Y4F9 1068 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 MUC6Q6W4X9 2439 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 LAMB2P55268 1798 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 U2SURPO15042 1029 aaKnown RBP4.37□□□□□ -1.71
CHD1-211ENST00000514344 PPP1R12BO60237 982 aaPredicted RBP4.37□□□□□ -1.71
CHD1-211ENST00000514344 UFL1O94874 794 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 BMP8BP34820 402 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 RTL5Q5HYW3 569 aaPredicted RBP4.37□□□□□ -1.71
CHD1-211ENST00000514344 MCM10Q7L590 875 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 ZFYVE28Q9HCC9 887 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 ANKIB1Q9P2G1 1089 aa4.37□□□□□ -1.71
CHD1-211ENST00000514344 IBTKQ9P2D0 1353 aaPredicted RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 TFRCP02786 760 aaKnown RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 DCTN1Q14203 1278 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 GIGYF2Q6Y7W6 1299 aaKnown RBP4.36□□□□□ -1.71
CHD1-211ENST00000514344 FAM43AQ8N2R8 423 aa4.36□□□□□ -1.71
CHD1-211ENST00000514344 DIS3LQ8TF46 1054 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms