RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PLAURQ03405 335 aa7.14□□□□□ -1.27
CLDND1-228ENST00000513873 PDE3BQ13370 1112 aa7.14□□□□□ -1.27
CLDND1-228ENST00000513873 ELP3Q9H9T3 547 aa7.14□□□□□ -1.27
CLDND1-228ENST00000513873 DNAJB12Q9NXW2 375 aaKnown RBP7.14□□□□□ -1.27
CLDND1-228ENST00000513873 TLR7Q9NYK1 1049 aaKnown RBP7.14□□□□□ -1.27
CLDND1-228ENST00000513873 DNMBPQ6XZF7 1577 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 HECW2Q9P2P5 1572 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 COL17A1Q9UMD9 1497 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-228ENST00000513873 TRIM28Q13263 835 aaKnown RBP7.13□□□□□ -1.27
CLDND1-228ENST00000513873 MICALL1Q8N3F8 863 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 PMEPA1Q969W9 287 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 SPACA7Q96KW9 195 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 CITED4Q96RK1 184 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 CCDC87Q9NVE4 849 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 ABI2Q9NYB9 513 aaPredicted RBP7.13□□□□□ -1.27
CLDND1-228ENST00000513873 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
CLDND1-228ENST00000513873 FZD6O60353 706 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 GHRHP01286 108 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 NRLP54845 237 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 FZD5Q13467 585 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 TRIP4Q15650 581 aaPredicted RBP7.12□□□□□ -1.27
CLDND1-228ENST00000513873 FAM35AQ86V20 835 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 WDR97A6NE52 1622 aa7.12□□□□□ -1.27
CLDND1-228ENST00000513873 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
CLDND1-228ENST00000513873 MMP20O60882 483 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 CPB1P15086 417 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 HYAL2Q12891 473 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 ELMSAN1Q6PJG2 1045 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 XKR5Q6UX68 686 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 TRPM4Q8TD43 1214 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 KDM6BO15054 1643 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 SNAPC4Q5SXM2 1469 aa7.11□□□□□ -1.27
CLDND1-228ENST00000513873 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 RGS9O75916 674 aaPredicted RBP7.1□□□□□ -1.27
CLDND1-228ENST00000513873 EIF2AK2P19525 551 aaKnown RBP7.1□□□□□ -1.27
CLDND1-228ENST00000513873 CES1P23141 567 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 SOX18P35713 384 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 GPLD1P80108 840 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 ARHGAP4P98171 946 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
CLDND1-228ENST00000513873 OR13H1Q8NG92 308 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 FMNL2Q96PY5 1086 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 GGNBP2Q9H3C7 697 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 CCDC88BA6NC98 1476 aa7.1□□□□□ -1.27
CLDND1-228ENST00000513873 LOC102724428A0A0B4J2F2 783 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 LILRB5O75023 590 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 PHACTR2O75167 634 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 MAPK1P28482 360 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 SIK1P57059 783 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 HFE2Q6ZVN8 426 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 GJD3Q8N144 294 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 NSUN5Q96P11 429 aaKnown RBP7.09□□□□□ -1.27
CLDND1-228ENST00000513873 DCTN4Q9UJW0 460 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 SYNJ2O15056 1496 aa7.09□□□□□ -1.27
CLDND1-228ENST00000513873 A6NHS1 94 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 FAM177BA6PVY3 158 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 C9orf172C9J069 976 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 M0R082 166 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 PSAPL1Q6NUJ1 521 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 ZSCAN29Q8IWY8 852 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-228ENST00000513873 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-228ENST00000513873 JPH1Q9HDC5 661 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-228ENST00000513873 TMEM63CQ9P1W3 806 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 POLA1P09884 1462 aaPredicted RBP7.08□□□□□ -1.28
CLDND1-228ENST00000513873 ABCC10Q5T3U5 1492 aa7.08□□□□□ -1.28
CLDND1-228ENST00000513873 TDRD9Q8NDG6 1382 aaKnown RBP7.08□□□□□ -1.28
CLDND1-228ENST00000513873 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
CLDND1-228ENST00000513873 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
CLDND1-228ENST00000513873 ADGRL1O94910 1474 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 ZBTB42B2RXF5 422 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 J3QW42 95 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 TNFRSF21O75509 655 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
CLDND1-228ENST00000513873 IRAK1P51617 712 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 ECM1Q16610 540 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 MDFIQ99750 246 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
CLDND1-228ENST00000513873 GRIN2BQ13224 1484 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 SOGA1O94964 1423 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 SMNDC1O75940 238 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLDND1-228ENST00000513873 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLDND1-228ENST00000513873 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 RBCK1Q9BYM8 510 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
CLDND1-228ENST00000513873 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
CLDND1-228ENST00000513873 PCMTD2Q9NV79 361 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 RNF112Q9ULX5 631 aa7.05□□□□□ -1.28
CLDND1-228ENST00000513873 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 ALBP02768 609 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 EDN3P14138 238 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 ILDR2Q71H61 639 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 TP53INP1Q96A56 240 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 CNTN3Q9P232 1028 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms