RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 TTC13Q8NBP0 860 aa16.43■□□□□ 0.22
SDHA-215ENST00000512962 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
SDHA-215ENST00000512962 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
SDHA-215ENST00000512962 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 OATP04181 439 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 LHX6Q9UPM6 363 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
SDHA-215ENST00000512962 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
SDHA-215ENST00000512962 NTSR2O95665 410 aa16.41■□□□□ 0.22
SDHA-215ENST00000512962 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
SDHA-215ENST00000512962 GOPCQ9HD26 462 aa16.41■□□□□ 0.22
SDHA-215ENST00000512962 MAP3K15Q6ZN16 1313 aa16.41■□□□□ 0.22
SDHA-215ENST00000512962 YDJCA8MPS7 323 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 RAD17O75943 681 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 EGFRP00533 1210 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 PXYLP1Q8TE99 480 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 NLRP7Q8WX94 980 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 ABCC4O15439 1325 aa16.4■□□□□ 0.22
SDHA-215ENST00000512962 HUNKP57058 714 aa16.39■□□□□ 0.21
SDHA-215ENST00000512962 NOGQ13253 232 aa16.39■□□□□ 0.21
SDHA-215ENST00000512962 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
SDHA-215ENST00000512962 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
SDHA-215ENST00000512962 PRSS12P56730 875 aa16.38■□□□□ 0.21
SDHA-215ENST00000512962 PRPF38BQ5VTL8 546 aaKnown RBP16.38■□□□□ 0.21
SDHA-215ENST00000512962 ATP6V0A2Q9Y487 856 aa16.38■□□□□ 0.21
SDHA-215ENST00000512962 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
SDHA-215ENST00000512962 ADM5C9JUS6 153 aa16.37■□□□□ 0.21
SDHA-215ENST00000512962 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
SDHA-215ENST00000512962 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
SDHA-215ENST00000512962 CDC37L1Q7L3B6 337 aa16.37■□□□□ 0.21
SDHA-215ENST00000512962 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
SDHA-215ENST00000512962 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
SDHA-215ENST00000512962 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
SDHA-215ENST00000512962 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
SDHA-215ENST00000512962 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
SDHA-215ENST00000512962 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
SDHA-215ENST00000512962 RNF186Q9NXI6 227 aa16.36■□□□□ 0.21
SDHA-215ENST00000512962 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SDHA-215ENST00000512962 TRPA1O75762 1119 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 MYL6BP14649 208 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 KIAA2012Q0VF49 1180 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
SDHA-215ENST00000512962 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
SDHA-215ENST00000512962 CDHR2Q9BYE9 1310 aa16.35■□□□□ 0.21
SDHA-215ENST00000512962 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
SDHA-215ENST00000512962 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
SDHA-215ENST00000512962 FAM217BQ9NTX9 383 aaPredicted RBP16.34■□□□□ 0.21
SDHA-215ENST00000512962 SAGE1Q9NXZ1 904 aa16.34■□□□□ 0.21
SDHA-215ENST00000512962 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
SDHA-215ENST00000512962 COL9A1P20849 921 aa16.33■□□□□ 0.2
SDHA-215ENST00000512962 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
SDHA-215ENST00000512962 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
SDHA-215ENST00000512962 DPP8Q6V1X1 898 aaPredicted RBP16.32■□□□□ 0.2
SDHA-215ENST00000512962 KIF6Q6ZMV9 814 aa16.32■□□□□ 0.2
SDHA-215ENST00000512962 LRP10Q7Z4F1 713 aa16.32■□□□□ 0.2
SDHA-215ENST00000512962 CSRNP1Q96S65 589 aa16.32■□□□□ 0.2
SDHA-215ENST00000512962 THUMPD2Q9BTF0 503 aaKnown RBP16.32■□□□□ 0.2
SDHA-215ENST00000512962 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
SDHA-215ENST00000512962 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
SDHA-215ENST00000512962 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
SDHA-215ENST00000512962 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
SDHA-215ENST00000512962 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
SDHA-215ENST00000512962 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
SDHA-215ENST00000512962 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
SDHA-215ENST00000512962 KCNQ5Q9NR82 932 aa16.31■□□□□ 0.2
SDHA-215ENST00000512962 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
SDHA-215ENST00000512962 SLC10A3P09131 477 aa16.3■□□□□ 0.2
SDHA-215ENST00000512962 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
SDHA-215ENST00000512962 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
SDHA-215ENST00000512962 KRT26Q7Z3Y9 468 aa16.3■□□□□ 0.2
SDHA-215ENST00000512962 CTU1Q7Z7A3 348 aaKnown RBP16.3■□□□□ 0.2
SDHA-215ENST00000512962 MPNDQ8N594 471 aa16.3■□□□□ 0.2
SDHA-215ENST00000512962 PSMD14O00487 310 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 ANXA1P04083 346 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
SDHA-215ENST00000512962 ZNF157P51786 506 aaPredicted RBP16.29■□□□□ 0.2
SDHA-215ENST00000512962 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 SP8Q8IXZ3 490 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
SDHA-215ENST00000512962 CLSPNQ9HAW4 1339 aa16.28■□□□□ 0.2
SDHA-215ENST00000512962 U2AF1L5P0DN76 240 aaPredicted RBP16.28■□□□□ 0.2
SDHA-215ENST00000512962 U2AF1Q01081 240 aaKnown RBP eCLIP16.28■□□□□ 0.2
SDHA-215ENST00000512962 TNIP1Q15025 636 aa16.28■□□□□ 0.2
SDHA-215ENST00000512962 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
SDHA-215ENST00000512962 DBNDD1Q9H9R9 158 aa16.28■□□□□ 0.2
SDHA-215ENST00000512962 PSME4Q14997 1843 aa16.28■□□□□ 0.2
SDHA-215ENST00000512962 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.2
SDHA-215ENST00000512962 H7C1D1 291 aa16.27■□□□□ 0.2
SDHA-215ENST00000512962 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
SDHA-215ENST00000512962 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
SDHA-215ENST00000512962 HTTP42858 3142 aa16.26■□□□□ 0.19
SDHA-215ENST00000512962 PAPPA2Q9BXP8 1791 aa16.26■□□□□ 0.19
SDHA-215ENST00000512962 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms