RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-217ENST00000512274 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 COL4A1P02462 1669 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 ANXA1P04083 346 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 ARMC5Q96C12 935 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 MYOZ2Q9NPC6 264 aa13.32□□□□□ -0.28
PDLIM5-217ENST00000512274 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 NF2P35240 595 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 NBPF9Q3BBW0 867 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 RSBN1LQ6PCB5 846 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 EFCC1Q9HA90 598 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 FZD1Q9UP38 647 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
PDLIM5-217ENST00000512274 MS4A1P11836 297 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 CAP1Q01518 475 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 EXOSC9Q06265 439 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 AGBL3Q8NEM8 1001 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 MBIPQ9NS73 344 aa13.3□□□□□ -0.28
PDLIM5-217ENST00000512274 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 DPF3Q92784 378 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 TSR2Q969E8 191 aaKnown RBP13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 SH3TC1Q8TE82 1336 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 PSME4Q14997 1843 aa13.29□□□□□ -0.28
PDLIM5-217ENST00000512274 IGF2BP3O00425 579 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 VAMP4O75379 141 aa13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 ZNF333Q96JL9 665 aa13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 ANGEL1Q9UNK9 670 aaKnown RBP13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 ZNF609O15014 1411 aa13.28□□□□□ -0.28
PDLIM5-217ENST00000512274 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 UFL1O94874 794 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 HOXB7P09629 217 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 CRHR2Q13324 411 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 SLC9C1Q4G0N8 1177 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 SLC10A4Q96EP9 437 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 GMLQ99445 158 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
PDLIM5-217ENST00000512274 SP3Q02447 781 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 PDIA6Q15084 440 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 MXD3Q9BW11 206 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 LAS1LQ9Y4W2 734 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
PDLIM5-217ENST00000512274 BCAR3O75815 825 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 SASH1O94885 1247 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 INHBEP58166 350 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
PDLIM5-217ENST00000512274 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 WNT10BO00744 389 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 IPO8O15397 1037 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 RPS8P62241 208 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 XAGE3Q8WTP9 111 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 SSH1Q8WYL5 1049 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 GGA1Q9UJY5 639 aa13.24□□□□□ -0.29
PDLIM5-217ENST00000512274 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
PDLIM5-217ENST00000512274 CENPFP49454 3210 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 ATF7IPQ6VMQ6 1270 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 PODXL2Q9NZ53 605 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
PDLIM5-217ENST00000512274 HTTP42858 3142 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms