RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 PRPF38BQ5VTL8 546 aaKnown RBP10□□□□□ -0.81
SMAD1-210ENST00000511255 NGEFQ8N5V2 710 aa10□□□□□ -0.81
SMAD1-210ENST00000511255 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
SMAD1-210ENST00000511255 BABAM1Q9NWV8 329 aa10□□□□□ -0.81
SMAD1-210ENST00000511255 KDM3BQ7LBC6 1761 aa10□□□□□ -0.81
SMAD1-210ENST00000511255 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 NPHP1O15259 732 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 MYL6BP14649 208 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 CLK2P49760 499 aaKnown RBP9.99□□□□□ -0.81
SMAD1-210ENST00000511255 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
SMAD1-210ENST00000511255 DDR1Q08345 913 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 NFIXQ14938 502 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 ZBTB3Q9H5J0 574 aa9.99□□□□□ -0.81
SMAD1-210ENST00000511255 POLRMTO00411 1230 aaKnown RBP9.98□□□□□ -0.81
SMAD1-210ENST00000511255 CHL1O00533 1208 aa9.98□□□□□ -0.81
SMAD1-210ENST00000511255 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
SMAD1-210ENST00000511255 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
SMAD1-210ENST00000511255 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
SMAD1-210ENST00000511255 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
SMAD1-210ENST00000511255 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
SMAD1-210ENST00000511255 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
SMAD1-210ENST00000511255 DGAT1O75907 488 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 CAMTA2O94983 1202 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 SERPINB2P05120 415 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 TM4SF1P30408 202 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 RPIAP49247 311 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 GNAI1P63096 354 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 KRT24Q2M2I5 525 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 TBC1D9BQ66K14 1250 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
SMAD1-210ENST00000511255 ZNF652Q9Y2D9 606 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
SMAD1-210ENST00000511255 LAMB4A4D0S4 1761 aa9.96□□□□□ -0.81
SMAD1-210ENST00000511255 A0A0G2JLW4 131 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 YY1P25490 414 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 TGFB2P61812 414 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
SMAD1-210ENST00000511255 KIF6Q6ZMV9 814 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 SETDB2Q96T68 719 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMAD1-210ENST00000511255 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 IFT57Q9NWB7 429 aa9.96□□□□□ -0.82
SMAD1-210ENST00000511255 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 ANXA1P04083 346 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 DPEP1P16444 411 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 YBX3P16989 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMAD1-210ENST00000511255 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 CCDC24Q8N4L8 307 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 ERBB4Q15303 1308 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 CARMIL3Q8ND23 1372 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 SCN7AQ01118 1682 aa9.95□□□□□ -0.82
SMAD1-210ENST00000511255 PXDNLA1KZ92 1463 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-210ENST00000511255 GRIN3BO60391 1043 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 AIMP1Q12904 312 aaKnown RBP9.94□□□□□ -0.82
SMAD1-210ENST00000511255 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 CLEC4GQ6UXB4 293 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 TTLL7Q6ZT98 887 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 WWC1Q8IX03 1113 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 NUDT12Q9BQG2 462 aa9.94□□□□□ -0.82
SMAD1-210ENST00000511255 NIP7Q9Y221 180 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMAD1-210ENST00000511255 MAP3K15Q6ZN16 1313 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 HOXB7P09629 217 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
SMAD1-210ENST00000511255 CHRNA5P30532 468 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 ST5P78524 1137 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 HLFQ16534 295 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 ZNF697Q5TEC3 545 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 NBPF5PQ86XG9 351 aaPredicted RBP9.93□□□□□ -0.82
SMAD1-210ENST00000511255 CNBD1Q8NA66 436 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 EVA1BQ9NVM1 165 aa9.93□□□□□ -0.82
SMAD1-210ENST00000511255 GDF9O60383 454 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR20EP86478 221 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR20CP86479 221 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR20DP86480 221 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR20BP86481 221 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR20AP86496 221 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PTPRNQ16849 979 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PRR5LQ6MZQ0 368 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 XAGE3Q8WTP9 111 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 TSR2Q969E8 191 aaKnown RBP9.92□□□□□ -0.82
SMAD1-210ENST00000511255 DDX21Q9NR30 783 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMAD1-210ENST00000511255 PIM2Q9P1W9 311 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 CHPF2Q9P2E5 772 aa9.92□□□□□ -0.82
SMAD1-210ENST00000511255 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 N4BP2Q86UW6 1770 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-210ENST00000511255 ERVV-1B6SEH8 477 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 H0YIN7 160 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 CCNYL3P0C7X3 344 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 GPTP24298 496 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
SMAD1-210ENST00000511255 COPS6Q7L5N1 327 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms