RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
NEK1-204ENST00000509912 ZNF592Q92610 1267 aa7□□□□□ -1.29
NEK1-204ENST00000509912 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
NEK1-204ENST00000509912 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
NEK1-204ENST00000509912 FAM13AO94988 1023 aa7□□□□□ -1.29
NEK1-204ENST00000509912 IRS1P35568 1242 aa7□□□□□ -1.29
NEK1-204ENST00000509912 RBM6P78332 1123 aaKnown RBP7□□□□□ -1.29
NEK1-204ENST00000509912 CC2D2BQ6DHV5 1058 aa7□□□□□ -1.29
NEK1-204ENST00000509912 TRIM52Q96A61 297 aa7□□□□□ -1.29
NEK1-204ENST00000509912 STIM2Q9P246 746 aa7□□□□□ -1.29
NEK1-204ENST00000509912 USP19O94966 1318 aa7□□□□□ -1.29
NEK1-204ENST00000509912 KIF24Q5T7B8 1368 aa7□□□□□ -1.29
NEK1-204ENST00000509912 IGFBP4P22692 258 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 RXRBP28702 533 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 BLMP54132 1417 aaPredicted RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 FANCCQ00597 558 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 DGKZQ13574 1117 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 BCL9LQ86UU0 1499 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 C2orf49Q9BVC5 232 aaPredicted RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 BCL11AQ9H165 835 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 TNS1Q9HBL0 1735 aaKnown RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 SORBS3O60504 671 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 LILRA1O75019 489 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 FMR1Q06787 632 aaKnown RBP eCLIP6.99□□□□□ -1.29
NEK1-204ENST00000509912 PSMD2Q13200 908 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 GPR152Q8TDT2 470 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 RBCK1Q9BYM8 510 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 SCHIP1Q9P0W5 487 aaPredicted RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 HSP90B1P14625 803 aaKnown RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 MCCD1P59942 119 aaPredicted RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 AGBL1Q96MI9 1066 aa6.99□□□□□ -1.29
NEK1-204ENST00000509912 THRAP3Q9Y2W1 955 aaKnown RBP6.99□□□□□ -1.29
NEK1-204ENST00000509912 AFF2P51816 1311 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 SCAMP3O14828 347 aaKnown RBP6.98□□□□□ -1.29
NEK1-204ENST00000509912 DPH6Q7L8W6 267 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 CNKSR1Q969H4 720 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 ANKRD26Q9UPS8 1709 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 A6NJY4 79 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 ZBTB24O43167 697 aaPredicted RBP6.98□□□□□ -1.29
NEK1-204ENST00000509912 DSC3Q14574 896 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 VPS72Q15906 364 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 MEI1Q5TIA1 1274 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 USPL1Q5W0Q7 1092 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 LHX8Q68G74 356 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 EDEM1Q92611 657 aa6.98□□□□□ -1.29
NEK1-204ENST00000509912 IL2RAP01589 272 aa6.97□□□□□ -1.29
NEK1-204ENST00000509912 CTSHP09668 335 aa6.97□□□□□ -1.29
NEK1-204ENST00000509912 PMFBP1Q8TBY8 1022 aa6.97□□□□□ -1.29
NEK1-204ENST00000509912 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
NEK1-204ENST00000509912 TLR1Q15399 786 aa6.97□□□□□ -1.29
NEK1-204ENST00000509912 TRPC5Q9UL62 973 aaPredicted RBP6.97□□□□□ -1.29
NEK1-204ENST00000509912 OPLAHO14841 1288 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 FOXO3O43524 673 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 PLCB3Q01970 1234 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 ZDHHC1Q8WTX9 485 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 ZNF395Q9H8N7 513 aaPredicted RBP6.96□□□□□ -1.29
NEK1-204ENST00000509912 IL21Q9HBE4 155 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 PCDH10Q9P2E7 1040 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 PRKAG2Q9UGJ0 569 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 RGS12O14924 1447 aa6.96□□□□□ -1.29
NEK1-204ENST00000509912 SEPT12Q8IYM1 358 aa6.96□□□□□ -1.3
NEK1-204ENST00000509912 RAB3GAP2Q9H2M9 1393 aa6.96□□□□□ -1.3
NEK1-204ENST00000509912 CPSF1Q10570 1443 aaKnown RBP6.96□□□□□ -1.3
NEK1-204ENST00000509912 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
NEK1-204ENST00000509912 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
NEK1-204ENST00000509912 ALDH16A1Q8IZ83 802 aa6.96□□□□□ -1.3
NEK1-204ENST00000509912 KDF1Q8NAX2 398 aaPredicted RBP6.96□□□□□ -1.3
NEK1-204ENST00000509912 NUDT16Q96DE0 195 aaKnown RBP6.96□□□□□ -1.3
NEK1-204ENST00000509912 ITGAEP38570 1179 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 ZAP70P43403 619 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 VAMP1P23763 118 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
NEK1-204ENST00000509912 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 GGNBP2Q9H3C7 697 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 CABP1Q9NZU7 370 aa6.95□□□□□ -1.3
NEK1-204ENST00000509912 NCAPD2Q15021 1401 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 RELBQ01201 579 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 C8orf37Q96NL8 207 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 TTC21AQ8NDW8 1320 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 PIK3C2AO00443 1686 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
NEK1-204ENST00000509912 SMTNP53814 917 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
NEK1-204ENST00000509912 MEN1O00255 615 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 NPR3P17342 541 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 CCDC116Q8IYX3 515 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 UBXN4Q92575 508 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 ZNF76P36508 570 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 EPS8L3Q8TE67 593 aaKnown RBP6.93□□□□□ -1.3
NEK1-204ENST00000509912 FAM129BQ96TA1 746 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 FOXD3Q9UJU5 478 aaPredicted RBP6.93□□□□□ -1.3
NEK1-204ENST00000509912 RGPD8O14715 1765 aaPredicted RBP6.93□□□□□ -1.3
NEK1-204ENST00000509912 BACH1O14867 736 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 TXLNAP40222 546 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 AIDAQ96BJ3 306 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 HSH2DQ96JZ2 352 aa6.93□□□□□ -1.3
NEK1-204ENST00000509912 BCS1LQ9Y276 419 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms