RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 WTIPA6NIX2 430 aaPredicted RBP18■□□□□ 0.47
HMGCR-208ENST00000509431 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
HMGCR-208ENST00000509431 LRCH3Q96II8 777 aa18■□□□□ 0.47
HMGCR-208ENST00000509431 NUDCQ9Y266 331 aa18■□□□□ 0.47
HMGCR-208ENST00000509431 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
HMGCR-208ENST00000509431 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
HMGCR-208ENST00000509431 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
HMGCR-208ENST00000509431 HSPA5P11021 654 aaKnown RBP17.99■□□□□ 0.47
HMGCR-208ENST00000509431 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
HMGCR-208ENST00000509431 ANKIB1Q9P2G1 1089 aa17.99■□□□□ 0.47
HMGCR-208ENST00000509431 MYO3BQ8WXR4 1341 aa17.98■□□□□ 0.47
HMGCR-208ENST00000509431 MYCP01106 439 aaPredicted RBP17.98■□□□□ 0.47
HMGCR-208ENST00000509431 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
HMGCR-208ENST00000509431 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
HMGCR-208ENST00000509431 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
HMGCR-208ENST00000509431 PDIA6Q15084 440 aa17.97■□□□□ 0.47
HMGCR-208ENST00000509431 GNRH1P01148 92 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 PRMT2P55345 433 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 UBE2Q1Q7Z7E8 422 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 DEFB123Q8N688 67 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 CLMNQ96JQ2 1002 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 ZFYVE28Q9HCC9 887 aa17.96■□□□□ 0.47
HMGCR-208ENST00000509431 PTPN18Q99952 460 aa17.95■□□□□ 0.46
HMGCR-208ENST00000509431 COL4A1P02462 1669 aa17.94■□□□□ 0.46
HMGCR-208ENST00000509431 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
HMGCR-208ENST00000509431 KIF22Q14807 665 aa17.94■□□□□ 0.46
HMGCR-208ENST00000509431 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
HMGCR-208ENST00000509431 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
HMGCR-208ENST00000509431 SASH1O94885 1247 aa17.93■□□□□ 0.46
HMGCR-208ENST00000509431 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
HMGCR-208ENST00000509431 GJA8P48165 433 aa17.93■□□□□ 0.46
HMGCR-208ENST00000509431 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
HMGCR-208ENST00000509431 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
HMGCR-208ENST00000509431 WDHD1O75717 1129 aaPredicted RBP17.92■□□□□ 0.46
HMGCR-208ENST00000509431 ATP2B4P23634 1241 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 GJA5P36382 358 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
HMGCR-208ENST00000509431 TAF1CQ15572 869 aaPredicted RBP17.92■□□□□ 0.46
HMGCR-208ENST00000509431 DACT2Q5SW24 774 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.92■□□□□ 0.46
HMGCR-208ENST00000509431 DEFB129Q9H1M3 183 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 FZD1Q9UP38 647 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 XDHP47989 1333 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 LAMA3Q16787 3333 aa17.92■□□□□ 0.46
HMGCR-208ENST00000509431 GJB1P08034 283 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
HMGCR-208ENST00000509431 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
HMGCR-208ENST00000509431 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 SUPT20HL1Q3ZLR7 823 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 STRIP1Q5VSL9 837 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 ANKRD13AQ8IZ07 590 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 XAGE3Q8WTP9 111 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
HMGCR-208ENST00000509431 ANXA1P04083 346 aa17.9■□□□□ 0.46
HMGCR-208ENST00000509431 HSP90B1P14625 803 aaKnown RBP17.9■□□□□ 0.46
HMGCR-208ENST00000509431 MTFR1Q15390 333 aa17.9■□□□□ 0.46
HMGCR-208ENST00000509431 ZBED3Q96IU2 234 aaPredicted RBP17.9■□□□□ 0.46
HMGCR-208ENST00000509431 MTMR10Q9NXD2 777 aa17.9■□□□□ 0.46
HMGCR-208ENST00000509431 SSC5DA1L4H1 1573 aa17.89■□□□□ 0.45
HMGCR-208ENST00000509431 EVI5O60447 810 aa17.89■□□□□ 0.45
HMGCR-208ENST00000509431 CAPN2P17655 700 aa17.89■□□□□ 0.45
HMGCR-208ENST00000509431 BMP8BP34820 402 aa17.89■□□□□ 0.45
HMGCR-208ENST00000509431 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
HMGCR-208ENST00000509431 UNC80Q8N2C7 3258 aa17.88■□□□□ 0.45
HMGCR-208ENST00000509431 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
HMGCR-208ENST00000509431 FARP2O94887 1054 aaPredicted RBP17.88■□□□□ 0.45
HMGCR-208ENST00000509431 NEFMP07197 916 aa17.88■□□□□ 0.45
HMGCR-208ENST00000509431 LACTBP83111 547 aaPredicted RBP17.88■□□□□ 0.45
HMGCR-208ENST00000509431 MS4A4AQ96JQ5 239 aa17.88■□□□□ 0.45
HMGCR-208ENST00000509431 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
HMGCR-208ENST00000509431 MED23Q9ULK4 1368 aa17.88■□□□□ 0.45
HMGCR-208ENST00000509431 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
HMGCR-208ENST00000509431 MXD3Q9BW11 206 aa17.87■□□□□ 0.45
HMGCR-208ENST00000509431 GTF2A2P52657 109 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 Q7L0L9 218 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 FBXW7Q969H0 707 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 OPTNQ96CV9 577 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 ZNF804BA4D1E1 1349 aa17.86■□□□□ 0.45
HMGCR-208ENST00000509431 TLR2O60603 784 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 GRK4P32298 578 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 ZCCHC17Q9NP64 241 aaKnown RBP17.85■□□□□ 0.45
HMGCR-208ENST00000509431 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
HMGCR-208ENST00000509431 ZSWIM8A7E2V4 1837 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 CCL15-CCL14A0A0B4J2E2 113 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 USP2O75604 605 aaPredicted RBP17.84■□□□□ 0.45
HMGCR-208ENST00000509431 CCL5P13501 91 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 HOXD10P28358 340 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 UBXN2AP68543 259 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 DLGAP5Q15398 846 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 CCL15Q16663 113 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 CCDC152Q4G0S7 254 aa17.84■□□□□ 0.45
HMGCR-208ENST00000509431 HELBQ8NG08 1087 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms