RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 NBPF11Q86T75 865 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.6■□□□□ 0.25
TRIM41-204ENST00000508930 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 CBFA2T2O43439 604 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 OAS2P29728 719 aaKnown RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 GNG11P61952 73 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 AK7Q96M32 723 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 C3P01024 1663 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 CPLX1O14810 134 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 FAM53CQ9NYF3 392 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 CWC15Q9P013 229 aaKnown RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 ADALQ6DHV7 355 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 C8orf76Q96K31 380 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 ERBB3P21860 1342 aa16.59■□□□□ 0.25
TRIM41-204ENST00000508930 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
TRIM41-204ENST00000508930 CASQ1P31415 396 aa16.58■□□□□ 0.25
TRIM41-204ENST00000508930 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.25
TRIM41-204ENST00000508930 ARFGAP3Q9NP61 516 aa16.58■□□□□ 0.25
TRIM41-204ENST00000508930 CHGBP05060 677 aa16.58■□□□□ 0.24
TRIM41-204ENST00000508930 EPC1Q9H2F5 836 aa16.58■□□□□ 0.24
TRIM41-204ENST00000508930 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
TRIM41-204ENST00000508930 SPTLC2O15270 562 aa16.58■□□□□ 0.24
TRIM41-204ENST00000508930 LRRFIP1Q32MZ4 808 aaKnown RBP16.58■□□□□ 0.24
TRIM41-204ENST00000508930 FMR1NBQ8N0W7 255 aaPredicted RBP16.58■□□□□ 0.24
TRIM41-204ENST00000508930 KCNG4Q8TDN1 519 aa16.58■□□□□ 0.24
TRIM41-204ENST00000508930 MYL6BP14649 208 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 NLRP12P59046 1061 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 LMAN1P49257 510 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 GOLGA8FQ08AF8 430 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 GOLGA8DPQ0D2H9 430 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
TRIM41-204ENST00000508930 ZNF202O95125 648 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
TRIM41-204ENST00000508930 RAD51AP2Q09MP3 1159 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 SMC1AQ14683 1233 aaKnown RBP16.56■□□□□ 0.24
TRIM41-204ENST00000508930 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
TRIM41-204ENST00000508930 ZSWIM4Q9H7M6 989 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 PHLPP2Q6ZVD8 1323 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 EFCAB8A8MWE9 144 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 HSP90AA4PQ58FG1 418 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 KCND1Q9NSA2 647 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 CAPN2P17655 700 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 TFCP2Q12800 502 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
TRIM41-204ENST00000508930 MARCKSP29966 332 aaPredicted RBP16.55■□□□□ 0.24
TRIM41-204ENST00000508930 USPL1Q5W0Q7 1092 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
TRIM41-204ENST00000508930 ATP5JP18859 108 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 C10orf67Q8IYJ2 551 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 MYD88Q99836 296 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
TRIM41-204ENST00000508930 GOLIM4O00461 696 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 ST5P78524 1137 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 CCDC158Q5M9N0 1113 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 AMOTL2Q9Y2J4 779 aa16.55■□□□□ 0.24
TRIM41-204ENST00000508930 TADA3O75528 432 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 ZSCAN26Q16670 478 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 STOX1Q6ZVD7 989 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 A0A1W2PQ27 194 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 A0A1W2PQ64 194 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 A0A1W2PQD8 194 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 PRAMEF22A3QJZ6 481 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 CTDNEP1O95476 244 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 TNNI3KQ59H18 835 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 FPGT-TNNI3KV9GXZ4 949 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
TRIM41-204ENST00000508930 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
TRIM41-204ENST00000508930 SYKP43405 635 aa16.53■□□□□ 0.24
TRIM41-204ENST00000508930 KCNJ6P48051 423 aa16.53■□□□□ 0.24
TRIM41-204ENST00000508930 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
TRIM41-204ENST00000508930 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
TRIM41-204ENST00000508930 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
TRIM41-204ENST00000508930 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms