RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
CLCN3-206ENST00000507875 IL13P35225 146 aa9.02□□□□□ -0.97
CLCN3-206ENST00000507875 ZNF76P36508 570 aa9.02□□□□□ -0.97
CLCN3-206ENST00000507875 COL19A1Q14993 1142 aa9.02□□□□□ -0.97
CLCN3-206ENST00000507875 QTRT2Q9H974 415 aaKnown RBP9.02□□□□□ -0.97
CLCN3-206ENST00000507875 CTSHP09668 335 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
CLCN3-206ENST00000507875 POTEHQ6S545 545 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
CLCN3-206ENST00000507875 CPDO75976 1380 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 DLG5Q8TDM6 1919 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 MAP3K19Q56UN5 1328 aa9.01□□□□□ -0.97
CLCN3-206ENST00000507875 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
CLCN3-206ENST00000507875 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
CLCN3-206ENST00000507875 TMC4Q7Z404 712 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 USP21Q9UK80 565 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 LMO7Q8WWI1 1683 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 ZBTB39O15060 712 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 DAB2P98082 770 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 IP6K1Q92551 441 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 TRPC5Q9UL62 973 aaPredicted RBP9□□□□□ -0.97
CLCN3-206ENST00000507875 PPME1Q9Y570 386 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 RGPD5Q99666 1765 aa9□□□□□ -0.97
CLCN3-206ENST00000507875 FZD6O60353 706 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 U2AF1L5P0DN76 240 aaPredicted RBP8.99□□□□□ -0.97
CLCN3-206ENST00000507875 AMPHP49418 695 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.978e-8■■■■□ 19.8
CLCN3-206ENST00000507875 NCAPD2Q15021 1401 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 KDRP35968 1356 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 PTK2Q05397 1052 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 PSMD2Q13200 908 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 ZNF521Q96K83 1311 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 MAPK8IP3Q9UPT6 1336 aa8.99□□□□□ -0.97
CLCN3-206ENST00000507875 COL14A1Q05707 1796 aaKnown RBP8.98□□□□□ -0.97
CLCN3-206ENST00000507875 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
CLCN3-206ENST00000507875 PARNO95453 639 aaKnown RBP8.98□□□□□ -0.97
CLCN3-206ENST00000507875 GCP02774 474 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 HOXC9P31274 260 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 ARHGEF25Q86VW2 580 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 MCF2L2Q86YR7 1114 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 WDR63Q8IWG1 891 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 GPATCH11Q8N954 259 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 PLEKHF1Q96S99 279 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 SUGT1Q9Y2Z0 365 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 PTMSP20962 102 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 EIF1AXP47813 144 aaKnown RBP8.98□□□□□ -0.97
CLCN3-206ENST00000507875 EIF4A2Q14240 407 aaKnown RBP8.98□□□□□ -0.97
CLCN3-206ENST00000507875 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 IL16Q14005 1332 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 IGSF1Q8N6C5 1336 aa8.98□□□□□ -0.97
CLCN3-206ENST00000507875 LMOD3Q0VAK6 560 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 RRS1Q15050 365 aaKnown RBP8.97□□□□□ -0.97
CLCN3-206ENST00000507875 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 U2SURPO15042 1029 aaKnown RBP8.97□□□□□ -0.97
CLCN3-206ENST00000507875 SCTRP47872 440 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
CLCN3-206ENST00000507875 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 PPP4R2Q9NY27 417 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 LAS1LQ9Y4W2 734 aaKnown RBP8.97□□□□□ -0.97
CLCN3-206ENST00000507875 RGPD2P0DJD1 1756 aa8.97□□□□□ -0.97
CLCN3-206ENST00000507875 PTPROQ16827 1216 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 PTPRNQ16849 979 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 TBCELQ5QJ74 424 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 POTEEQ6S8J3 1075 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 SLC43A3Q8NBI5 491 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 SLC39A7Q92504 469 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 GMLQ99445 158 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 CFHR5Q9BXR6 569 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 INPP5FQ9Y2H2 1132 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 RIPOR2Q9Y4F9 1068 aa8.96□□□□□ -0.97
CLCN3-206ENST00000507875 PARP4Q9UKK3 1724 aaKnown RBP8.96□□□□□ -0.98
CLCN3-206ENST00000507875 MAFGO15525 162 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 RAB15P59190 212 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 TCP11L2Q8N4U5 519 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 NIF3L1Q9GZT8 377 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
CLCN3-206ENST00000507875 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
CLCN3-206ENST00000507875 VIRMAQ69YN4 1812 aaKnown RBP8.95□□□□□ -0.98
CLCN3-206ENST00000507875 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 APAF1O14727 1248 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 NPR3P17342 541 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 RBL2Q08999 1139 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 TMTC2Q8N394 836 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 THAP11Q96EK4 314 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 NDUFB5O43674 189 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 HTATSF1O43719 755 aaKnown RBP8.95□□□□□ -0.98
CLCN3-206ENST00000507875 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-206ENST00000507875 SCUBE3Q8IX30 993 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 TRMT2AQ8IZ69 625 aaKnown RBP8.95□□□□□ -0.98
CLCN3-206ENST00000507875 SCG3Q8WXD2 468 aaKnown RBP8.95□□□□□ -0.98
CLCN3-206ENST00000507875 NWD2Q9ULI1 1742 aa8.95□□□□□ -0.98
CLCN3-206ENST00000507875 TMPOP42166 694 aaKnown RBP8.94□□□□□ -0.98
CLCN3-206ENST00000507875 SETQ01105 290 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-206ENST00000507875 PLCB3Q01970 1234 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 891.2 ms