RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 TRIM28Q13263 835 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 TXNDC11Q6PKC3 985 aa6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 RNF19AQ9NV58 838 aa6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 DZANK1Q9NVP4 752 aa6.36□□□□□ -1.39
CDC42SE2-210ENST00000506929 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 HGSNATQ68CP4 663 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 EPS8L3Q8TE67 593 aaKnown RBP6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 CITED4Q96RK1 184 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 OSMRQ99650 979 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 PBX4Q9BYU1 374 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 FRRS1LQ9P0K9 344 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 AMOTL2Q9Y2J4 779 aa6.35□□□□□ -1.39
CDC42SE2-210ENST00000506929 A0A1W2PP55 124 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 C1QTNF9BB2RNN3 333 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 TREHO43280 583 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 PROCP04070 461 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 PDE3BQ13370 1112 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 TTC9Q92623 222 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 ASB16Q96NS5 453 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 CSRNP1Q96S65 589 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
CDC42SE2-210ENST00000506929 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 DEAF1O75398 565 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 P4HBP07237 508 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 RAC1P63000 192 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 PLCB3Q01970 1234 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 TAGLNQ01995 201 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 GRIK4Q16099 956 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 DNAJC14Q6Y2X3 702 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 GALNT12Q8IXK2 581 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 NXPE3Q969Y0 559 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 SPACA7Q96KW9 195 aa6.33□□□□□ -1.4
CDC42SE2-210ENST00000506929 A0A0A0MRY4 1105 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 PNMA6FA0A0J9YX94 578 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 ANKRD33BA6NCL7 494 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 LINC01387J3KSC0 135 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 APBA3O96018 575 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 EPHA1P21709 976 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 CHRNA4P43681 627 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 MAPK8P45983 427 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 SHISA2Q6UWI4 295 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 ALKBH8Q96BT7 664 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 DMRTB1Q96MA1 342 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 NACC1Q96RE7 527 aa6.32□□□□□ -1.4
CDC42SE2-210ENST00000506929 GRIA4P48058 902 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 FMR1Q06787 632 aaKnown RBP eCLIP6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 PMEPA1Q969W9 287 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 TCF12Q99081 682 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 CARD10Q9BWT7 1032 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 RBSNQ9H1K0 784 aa6.31□□□□□ -1.4
CDC42SE2-210ENST00000506929 TM4SF5O14894 197 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 SMNDC1O75940 238 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 ELNP15502 786 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 DTWD1Q8N5C7 304 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 GALNT11Q8NCW6 608 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 ASAP3Q8TDY4 903 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 MUC3BQ9H195 1237 aa6.3□□□□□ -1.4
CDC42SE2-210ENST00000506929 EDN3P14138 238 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 CDC27P30260 824 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 GATA4P43694 442 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 NPAS4Q8IUM7 802 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 ZSCAN29Q8IWY8 852 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 TMEM102Q8N9M5 508 aaPredicted RBP6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 LIN7BQ9HAP6 207 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 KCNK4Q9NYG8 393 aa6.29□□□□□ -1.4
CDC42SE2-210ENST00000506929 ZBTB7CA1YPR0 619 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 DDX3YO15523 660 aaKnown RBP6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 SELPP16109 830 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 GRM2Q14416 872 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 CCDC27Q2M243 656 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 FMR1NBQ8N0W7 255 aaPredicted RBP6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 SOX13Q9UN79 622 aa6.28□□□□□ -1.4
CDC42SE2-210ENST00000506929 C9orf172C9J069 976 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 GADD45BO75293 160 aaPredicted RBP6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 NRG1Q02297 640 aaPredicted RBP6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 KIAA0319Q5VV43 1072 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 CCNJLQ8IV13 435 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 CACTIN-AS1Q8N1I8 211 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 LENG1Q96BZ8 264 aaPredicted RBP6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 BHLHE41Q9C0J9 482 aaPredicted RBP6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 EHD4Q9H223 541 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 PPME1Q9Y570 386 aa6.27□□□□□ -1.41
CDC42SE2-210ENST00000506929 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
CDC42SE2-210ENST00000506929 WISP1O95388 367 aa6.26□□□□□ -1.41
CDC42SE2-210ENST00000506929 PTPRAP18433 802 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms