RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
LIN54-206ENST00000506560 INTS4Q96HW7 963 aaKnown RBP14.59□□□□□ -0.07
LIN54-206ENST00000506560 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
LIN54-206ENST00000506560 LRRC4BQ9NT99 713 aa14.59□□□□□ -0.07
LIN54-206ENST00000506560 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
LIN54-206ENST00000506560 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
LIN54-206ENST00000506560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.59□□□□□ -0.07
LIN54-206ENST00000506560 BRD1O95696 1058 aa14.58□□□□□ -0.07
LIN54-206ENST00000506560 RPS6KB1P23443 525 aa14.58□□□□□ -0.07
LIN54-206ENST00000506560 CCDC152Q4G0S7 254 aa14.58□□□□□ -0.07
LIN54-206ENST00000506560 HELLSQ9NRZ9 838 aa14.58□□□□□ -0.07
LIN54-206ENST00000506560 SBF2Q86WG5 1849 aa14.58□□□□□ -0.07
LIN54-206ENST00000506560 NHSQ6T4R5 1651 aa14.58□□□□□ -0.08
LIN54-206ENST00000506560 RNF20Q5VTR2 975 aa14.58□□□□□ -0.08
LIN54-206ENST00000506560 CLEC17AQ6ZS10 378 aa14.58□□□□□ -0.08
LIN54-206ENST00000506560 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
LIN54-206ENST00000506560 IQSEC3Q9UPP2 1182 aaPredicted RBP14.58□□□□□ -0.08
LIN54-206ENST00000506560 ZNF652Q9Y2D9 606 aa14.58□□□□□ -0.08
LIN54-206ENST00000506560 RPS6KA4O75676 772 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 BCAMP50895 628 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 STK3Q13188 491 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
LIN54-206ENST00000506560 HAND2P61296 217 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 CLEC4GQ6UXB4 293 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 QTRT2Q9H974 415 aaKnown RBP14.57□□□□□ -0.08
LIN54-206ENST00000506560 WWC3Q9ULE0 1092 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 TCHHQ07283 1943 aa14.57□□□□□ -0.08
LIN54-206ENST00000506560 IDH1O75874 414 aaKnown RBP14.56□□□□□ -0.08
LIN54-206ENST00000506560 CHRNDQ07001 517 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
LIN54-206ENST00000506560 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 NARFQ9UHQ1 456 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 U3KPZ7 1027 aaPredicted RBP14.56□□□□□ -0.08
LIN54-206ENST00000506560 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 ATRNO75882 1429 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 GOLGB1Q14789 3259 aaKnown RBP14.56□□□□□ -0.08
LIN54-206ENST00000506560 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 LPIN2Q92539 896 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 ZNF831Q5JPB2 1677 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 MROH5Q6ZUA9 1318 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 LAMA4Q16363 1823 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 AK7Q96M32 723 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 LMBRD1Q9NUN5 540 aa14.56□□□□□ -0.08
LIN54-206ENST00000506560 TRPC5Q9UL62 973 aaPredicted RBP14.56□□□□□ -0.08
LIN54-206ENST00000506560 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 MYH7P12883 1935 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 ONECUT3O60422 494 aaPredicted RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 PSMA5P28066 241 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 IGHMBP2P38935 993 aaKnown RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 FAM196AQ6ZSG2 479 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 DENND2AQ9ULE3 1009 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 SLC9C2Q5TAH2 1124 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 DSCC1Q9BVC3 393 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 BRPF3Q9ULD4 1205 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 NSFL1CQ9UNZ2 370 aaKnown RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 RTCBQ9Y3I0 505 aaKnown RBP14.55□□□□□ -0.08
LIN54-206ENST00000506560 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
LIN54-206ENST00000506560 SYT1P21579 422 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 GJB2P29033 226 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 Q6ZUG5 572 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 LAMB2P55268 1798 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 GPAA1O43292 621 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 ZPR1O75312 459 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
LIN54-206ENST00000506560 GPHNQ9NQX3 736 aaPredicted RBP14.54□□□□□ -0.08
LIN54-206ENST00000506560 SMC3Q9UQE7 1217 aa14.54□□□□□ -0.08
LIN54-206ENST00000506560 SLC5A1P13866 664 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 KLRK1P26718 216 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 ADD2P35612 726 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 APPBP2Q92624 585 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 LY75O60449 1722 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 FGAP02671 866 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 NBPF5PQ86XG9 351 aaPredicted RBP14.53□□□□□ -0.08
LIN54-206ENST00000506560 SETDB2Q96T68 719 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 ZNF532Q9HCE3 1301 aa14.53□□□□□ -0.08
LIN54-206ENST00000506560 E7EWF7 191 aa14.52□□□□□ -0.08
LIN54-206ENST00000506560 GYG1P46976 350 aa14.52□□□□□ -0.08
LIN54-206ENST00000506560 SPATA5Q8NB90 893 aa14.52□□□□□ -0.08
LIN54-206ENST00000506560 BRF1Q92994 677 aa14.52□□□□□ -0.08
LIN54-206ENST00000506560 DDX49Q9Y6V7 483 aaKnown RBP14.52□□□□□ -0.08
LIN54-206ENST00000506560 TRIM37O94972 964 aa14.52□□□□□ -0.09
LIN54-206ENST00000506560 PDE6AP16499 860 aa14.52□□□□□ -0.09
LIN54-206ENST00000506560 SF3B3Q15393 1217 aaKnown RBP14.52□□□□□ -0.09
LIN54-206ENST00000506560 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.09
LIN54-206ENST00000506560 RTL9Q8NET4 1388 aa14.52□□□□□ -0.09
LIN54-206ENST00000506560 GAS2L3Q86XJ1 694 aa14.51□□□□□ -0.09
LIN54-206ENST00000506560 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
LIN54-206ENST00000506560 ZNF512BQ96KM6 892 aaPredicted RBP14.51□□□□□ -0.09
LIN54-206ENST00000506560 RBM27Q9P2N5 1060 aaKnown RBP14.51□□□□□ -0.09
LIN54-206ENST00000506560 C4AP0C0L4 1744 aa14.51□□□□□ -0.09
LIN54-206ENST00000506560 C4BP0C0L5 1744 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms