RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 USP20Q9Y2K6 914 aa9.82□□□□□ -0.84
CHD1-204ENST00000505982 ECM1Q16610 540 aa9.81□□□□□ -0.84
CHD1-204ENST00000505982 TREML1Q86YW5 311 aa9.81□□□□□ -0.84
CHD1-204ENST00000505982 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
CHD1-204ENST00000505982 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
CHD1-204ENST00000505982 ASB16Q96NS5 453 aa9.81□□□□□ -0.84
CHD1-204ENST00000505982 NDUFB5O43674 189 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 SOX18P35713 384 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 COX20Q5RI15 118 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 BRPF3Q9ULD4 1205 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 LRFN2Q9ULH4 789 aa9.8□□□□□ -0.84
CHD1-204ENST00000505982 MMP20O60882 483 aa9.79□□□□□ -0.84
CHD1-204ENST00000505982 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
CHD1-204ENST00000505982 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
CHD1-204ENST00000505982 NSUN5Q96P11 429 aaKnown RBP9.79□□□□□ -0.84
CHD1-204ENST00000505982 MUC3BQ9H195 1237 aa9.79□□□□□ -0.84
CHD1-204ENST00000505982 STIM2Q9P246 746 aa9.79□□□□□ -0.84
CHD1-204ENST00000505982 UNCXA6NJT0 531 aa9.78□□□□□ -0.84
CHD1-204ENST00000505982 ZNF16P17020 682 aaPredicted RBP9.78□□□□□ -0.84
CHD1-204ENST00000505982 NPR3P17342 541 aa9.78□□□□□ -0.84
CHD1-204ENST00000505982 ALKBH2Q6NS38 261 aa9.78□□□□□ -0.84
CHD1-204ENST00000505982 GOLGA2P5Q9HBQ8 144 aa9.78□□□□□ -0.84
CHD1-204ENST00000505982 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
CHD1-204ENST00000505982 SSTR4P31391 388 aa9.77□□□□□ -0.85
CHD1-204ENST00000505982 EIF1AXP47813 144 aaKnown RBP9.77□□□□□ -0.85
CHD1-204ENST00000505982 SETDB1Q15047 1291 aa9.77□□□□□ -0.85
CHD1-204ENST00000505982 ABTB2Q8N961 1025 aa9.77□□□□□ -0.85
CHD1-204ENST00000505982 MRRFQ96E11 262 aaKnown RBP9.77□□□□□ -0.85
CHD1-204ENST00000505982 KCNMB2Q9Y691 235 aa9.77□□□□□ -0.85
CHD1-204ENST00000505982 GSC2O15499 205 aa9.76□□□□□ -0.85
CHD1-204ENST00000505982 GLB1P16278 677 aa9.76□□□□□ -0.85
CHD1-204ENST00000505982 Q6ZS46 218 aa9.76□□□□□ -0.85
CHD1-204ENST00000505982 RAXQ9Y2V3 346 aa9.76□□□□□ -0.85
CHD1-204ENST00000505982 COL17A1Q9UMD9 1497 aaPredicted RBP9.75□□□□□ -0.85
CHD1-204ENST00000505982 BRD2P25440 801 aaKnown RBP9.75□□□□□ -0.85
CHD1-204ENST00000505982 NLRP13Q86W25 1043 aa9.75□□□□□ -0.85
CHD1-204ENST00000505982 BCL11AQ9H165 835 aa9.75□□□□□ -0.85
CHD1-204ENST00000505982 PPME1Q9Y570 386 aa9.75□□□□□ -0.85
CHD1-204ENST00000505982 BTBD11A6QL63 1104 aa9.74□□□□□ -0.85
CHD1-204ENST00000505982 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
CHD1-204ENST00000505982 PAX4O43316 350 aa9.74□□□□□ -0.85
CHD1-204ENST00000505982 CD97P48960 835 aa9.74□□□□□ -0.85
CHD1-204ENST00000505982 AGGF1Q8N302 714 aaeCLIP9.74□□□□□ -0.85
CHD1-204ENST00000505982 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
CHD1-204ENST00000505982 EAPPQ56P03 285 aaPredicted RBP9.73□□□□□ -0.85
CHD1-204ENST00000505982 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
CHD1-204ENST00000505982 RBCK1Q9BYM8 510 aa9.73□□□□□ -0.85
CHD1-204ENST00000505982 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
CHD1-204ENST00000505982 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
CHD1-204ENST00000505982 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.72□□□□□ -0.85
CHD1-204ENST00000505982 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
CHD1-204ENST00000505982 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
CHD1-204ENST00000505982 DHX15O43143 795 aaKnown RBP9.71□□□□□ -0.86
CHD1-204ENST00000505982 COBLO75128 1261 aa9.71□□□□□ -0.86
CHD1-204ENST00000505982 SPACA7Q96KW9 195 aa9.71□□□□□ -0.86
CHD1-204ENST00000505982 FZD6O60353 706 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 IRAK1P51617 712 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 FBXO33Q7Z6M2 555 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
CHD1-204ENST00000505982 CEP41Q9BYV8 373 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 FAM13BQ9NYF5 915 aa9.7□□□□□ -0.86
CHD1-204ENST00000505982 KIAA1522Q9P206 1035 aaPredicted RBP9.7□□□□□ -0.86
CHD1-204ENST00000505982 LINC01387J3KSC0 135 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 TXKP42681 527 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
CHD1-204ENST00000505982 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 COL19A1Q14993 1142 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 ETFBKMTQ8IXQ9 262 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 OR13H1Q8NG92 308 aa9.69□□□□□ -0.86
CHD1-204ENST00000505982 UBAP1LF5GYI3 381 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 ZBTB39O15060 712 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 CD68P34810 354 aaPredicted RBP9.68□□□□□ -0.86
CHD1-204ENST00000505982 TAGLNQ01995 201 aaKnown RBP9.68□□□□□ -0.86
CHD1-204ENST00000505982 HYAL2Q12891 473 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 GALNT11Q8NCW6 608 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 DMRTB1Q96MA1 342 aa9.68□□□□□ -0.86
CHD1-204ENST00000505982 SMNDC1O75940 238 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD1-204ENST00000505982 P4HBP07237 508 aaKnown RBP9.67□□□□□ -0.86
CHD1-204ENST00000505982 ZAP70P43403 619 aa9.67□□□□□ -0.86
CHD1-204ENST00000505982 MAPK8P45983 427 aa9.67□□□□□ -0.86
CHD1-204ENST00000505982 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
CHD1-204ENST00000505982 FAM26DQ5JW98 314 aa9.67□□□□□ -0.86
CHD1-204ENST00000505982 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
CHD1-204ENST00000505982 POLIQ9UNA4 740 aa9.67□□□□□ -0.86
CHD1-204ENST00000505982 KIAA1324LA8MWY0 1029 aaPredicted RBP9.66□□□□□ -0.86
CHD1-204ENST00000505982 TREHO43280 583 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 TGFB1P01137 390 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 PCSK2P16519 638 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 CDC27P30260 824 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 PLCB3Q01970 1234 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 UVSSAQ2YD98 709 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 ACAD11Q709F0 780 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 TTC16Q8NEE8 873 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 EDEM1Q92611 657 aa9.66□□□□□ -0.86
CHD1-204ENST00000505982 LACRTQ9GZZ8 138 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms