RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
LETM1-203ENST00000505551 DEF6Q9H4E7 631 aa15.43■□□□□ 0.06
LETM1-203ENST00000505551 DNAI1Q9UI46 699 aa15.43■□□□□ 0.06
LETM1-203ENST00000505551 ADAMTSL3P82987 1691 aa15.43■□□□□ 0.06
LETM1-203ENST00000505551 EIF3CLB5ME19 914 aaKnown RBP15.42■□□□□ 0.06
LETM1-203ENST00000505551 CCDC172P0C7W6 258 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 ATF3P18847 181 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 SATB1Q01826 763 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 LRRFIP1Q32MZ4 808 aaKnown RBP15.42■□□□□ 0.06
LETM1-203ENST00000505551 GORABQ5T7V8 394 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 LEKR1Q6ZMV7 388 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 PPM1EQ8WY54 764 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 SYTL4Q96C24 671 aaPredicted RBP15.42■□□□□ 0.06
LETM1-203ENST00000505551 EIF3CQ99613 913 aaKnown RBP15.42■□□□□ 0.06
LETM1-203ENST00000505551 CPP00450 1065 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 PDCP20941 246 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 GSCP56915 257 aaPredicted RBP15.42■□□□□ 0.06
LETM1-203ENST00000505551 EVCP57679 992 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 PDRG1Q9NUG6 133 aa15.42■□□□□ 0.06
LETM1-203ENST00000505551 H3BQF6 201 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 ME3Q16798 604 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 GPR161Q8N6U8 529 aaKnown RBP15.41■□□□□ 0.06
LETM1-203ENST00000505551 BICD2Q8TD16 824 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 ARFGAP3Q9NP61 516 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 BECN2A8MW95 431 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 ANXA1P04083 346 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 CORO7P57737 925 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 TAF7Q15545 349 aaPredicted RBP15.41■□□□□ 0.06
LETM1-203ENST00000505551 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 KCNH5Q8NCM2 988 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 CARD6Q9BX69 1037 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 TFIP11Q9UBB9 837 aaKnown RBP15.41■□□□□ 0.06
LETM1-203ENST00000505551 ADCY9O60503 1353 aa15.41■□□□□ 0.06
LETM1-203ENST00000505551 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 GNAI2P04899 355 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 ZNF530Q6P9A1 599 aaPredicted RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 TRIM65Q6PJ69 517 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 DNAJC14Q6Y2X3 702 aaPredicted RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 STK31Q9BXU1 1019 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 ZSWIM6Q9HCJ5 1215 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 CTAGE5O15320 804 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 GIGYF1O75420 1035 aaPredicted RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
LETM1-203ENST00000505551 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 PARP3Q9Y6F1 533 aa15.4■□□□□ 0.06
LETM1-203ENST00000505551 FANCGO15287 622 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 CCP110O43303 1012 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 MAP2K7O14733 419 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
LETM1-203ENST00000505551 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 ARHGEF25Q86VW2 580 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 NECAB1Q8N987 351 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 KCNB2Q92953 911 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
LETM1-203ENST00000505551 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 E2F4Q16254 413 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 HOMER1Q86YM7 354 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
LETM1-203ENST00000505551 DONSONQ9NYP3 566 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
LETM1-203ENST00000505551 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
LETM1-203ENST00000505551 JAKMIP1Q96N16 626 aaKnown RBP15.38■□□□□ 0.05
LETM1-203ENST00000505551 CXorf56Q9H5V9 222 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 CYP46A1Q9Y6A2 500 aa15.38■□□□□ 0.05
LETM1-203ENST00000505551 URI1O94763 535 aaPredicted RBP15.37■□□□□ 0.05
LETM1-203ENST00000505551 OTUD6BQ8N6M0 293 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 EPC1Q9H2F5 836 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 MKRN1Q9UHC7 482 aaKnown RBP15.37■□□□□ 0.05
LETM1-203ENST00000505551 SMC2O95347 1197 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 MMS22LQ6ZRQ5 1243 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 ARMCX6Q7L4S7 300 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 PNMA6EA0A0J9YXQ4 647 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 NRDCO43847 1150 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 ATP8B2P98198 1209 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 FLIIQ13045 1269 aa15.37■□□□□ 0.05
LETM1-203ENST00000505551 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 AOPEPQ8N6M6 819 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 PI4K2BQ8TCG2 481 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 TPCN1Q9ULQ1 816 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 TEFQ10587 303 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 LONRF2Q1L5Z9 754 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 CEP57L1Q8IYX8 460 aa15.36■□□□□ 0.05
LETM1-203ENST00000505551 MSL3Q8N5Y2 521 aaKnown RBP15.36■□□□□ 0.05
LETM1-203ENST00000505551 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms