RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 SLC39A6Q13433 755 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 KARSQ15046 597 aaKnown RBP9.24□□□□□ -0.93
PROM1-206ENST00000505450 ZNF589Q86UQ0 364 aaPredicted RBP9.24□□□□□ -0.93
PROM1-206ENST00000505450 MLH3Q9UHC1 1453 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 ZSCAN12O43309 604 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 NECTIN1Q15223 517 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 KSR2Q6VAB6 950 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 MAP4K1Q92918 833 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 TPM1P09493 284 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 CCDC12Q8WUD4 166 aaPredicted RBP9.23□□□□□ -0.93
PROM1-206ENST00000505450 ZNF622Q969S3 477 aaKnown RBP eCLIP9.23□□□□□ -0.93
PROM1-206ENST00000505450 FUCA2Q9BTY2 467 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 RNF216Q9NWF9 866 aaPredicted RBP9.23□□□□□ -0.93
PROM1-206ENST00000505450 CTIFO43310 598 aaKnown RBP9.23□□□□□ -0.93
PROM1-206ENST00000505450 PHACTR2O75167 634 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 SUCLG2Q96I99 432 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 FLT4P35916 1363 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 ABCC3O15438 1527 aa9.23□□□□□ -0.93
PROM1-206ENST00000505450 SPTLC2O15270 562 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 ZBTB7AO95365 584 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 KIF4BQ2VIQ3 1234 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 JMYQ8N9B5 988 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 RASSF8Q8NHQ8 419 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 MRFAP1L1Q96HT8 127 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 HOOK1Q9UJC3 728 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 ELP1O95163 1332 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 SEC31AO94979 1220 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 MCMDC2Q4G0Z9 681 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 KRBA2Q6ZNG9 492 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.22□□□□□ -0.93
PROM1-206ENST00000505450 TAF6LQ9Y6J9 622 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 CPSF1Q10570 1443 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 A0A087WZG4 1122 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 SYKP43405 635 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 PPFIBP1Q86W92 1011 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 PLA2G4DQ86XP0 818 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 ARHGEF40Q8TER5 1519 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 KLF18A0A0U1RQI7 1052 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 TFCP2Q12800 502 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 SAFBQ15424 915 aaKnown RBP eCLIP9.22□□□□□ -0.93
PROM1-206ENST00000505450 CNNM3Q8NE01 707 aa9.22□□□□□ -0.93
PROM1-206ENST00000505450 PUF60Q9UHX1 559 aaKnown RBP9.22□□□□□ -0.93
PROM1-206ENST00000505450 AATKQ6ZMQ8 1374 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 COL3A1P02461 1466 aaPredicted RBP9.21□□□□□ -0.93
PROM1-206ENST00000505450 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.93
PROM1-206ENST00000505450 IFIT1P09914 478 aaKnown RBP9.21□□□□□ -0.93
PROM1-206ENST00000505450 IL2RBP14784 551 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 FAM193AP78312 1265 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 FANCCQ00597 558 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 HSP90AB3PQ58FF7 597 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 JAKMIP3Q5VZ66 844 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 LINS1Q8NG48 757 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 ZCRB1Q8TBF4 217 aaKnown RBP9.21□□□□□ -0.93
PROM1-206ENST00000505450 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 MAP3K5Q99683 1374 aa9.21□□□□□ -0.93
PROM1-206ENST00000505450 ALDH1L1O75891 902 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 RXRAP19793 462 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
PROM1-206ENST00000505450 COPS6Q7L5N1 327 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 ADGRB2O60241 1585 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 CLCN6P51797 869 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 DPCR1Q3MIW9 517 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 EPC1Q9H2F5 836 aa9.21□□□□□ -0.94
PROM1-206ENST00000505450 RIMS1Q86UR5 1692 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 HOXC9P31274 260 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 KCNQ4P56696 695 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 EIF4A1P60842 406 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 TIMM10P62072 90 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 ZCCHC17Q9NP64 241 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 LZTFL1Q9NQ48 299 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 CCNL1Q9UK58 526 aaPredicted RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 ARAP3Q8WWN8 1544 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 ETF1P62495 437 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 SCRN1Q12765 414 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 POLA2Q14181 598 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 MORC2Q9Y6X9 1032 aaPredicted RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 HNRNPH2P55795 449 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 AKAP17AQ02040 695 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 DHX8Q14562 1220 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 IMMTQ16891 758 aaKnown RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 TXLNBQ8N3L3 684 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
PROM1-206ENST00000505450 ADGRB1O14514 1584 aa9.2□□□□□ -0.94
PROM1-206ENST00000505450 SALL3Q9BXA9 1300 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms