RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 SEC31BQ9NQW1 1179 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 COL4A1P02462 1669 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 NTSR2O95665 410 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 ZNF445P59923 1031 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 LINC00116Q8NCU8 138 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
LINC02239-201ENST00000504339 LRRC2Q9BYS8 371 aa10.79□□□□□ -0.68
LINC02239-201ENST00000504339 PUS7LQ9H0K6 701 aaKnown RBP10.79□□□□□ -0.68
LINC02239-201ENST00000504339 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
LINC02239-201ENST00000504339 PHKA1P46020 1223 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 VPS72Q15906 364 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 C8orf37Q96NL8 207 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 F13A1P00488 732 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
LINC02239-201ENST00000504339 EXOSC10Q01780 885 aaKnown RBP10.78□□□□□ -0.68
LINC02239-201ENST00000504339 KRT32Q14532 448 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 GORABQ5T7V8 394 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 ZNF512BQ96KM6 892 aaPredicted RBP10.78□□□□□ -0.68
LINC02239-201ENST00000504339 UTP14AQ9BVJ6 771 aaKnown RBP10.78□□□□□ -0.68
LINC02239-201ENST00000504339 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
LINC02239-201ENST00000504339 CNPY2Q9Y2B0 182 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 AKAP11Q9UKA4 1901 aa10.78□□□□□ -0.68
LINC02239-201ENST00000504339 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 STK3Q13188 491 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 ANKRD1Q15327 319 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 CCDC102BQ68D86 513 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 Q6ZUG5 572 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
LINC02239-201ENST00000504339 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
LINC02239-201ENST00000504339 ABCC12Q96J65 1359 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 E7EWF7 191 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 AK7Q96M32 723 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
LINC02239-201ENST00000504339 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC02239-201ENST00000504339 MYH3P11055 1940 aa10.76□□□□□ -0.69
LINC02239-201ENST00000504339 JAK2O60674 1132 aa10.76□□□□□ -0.69
LINC02239-201ENST00000504339 WTIPA6NIX2 430 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 FGAP02671 866 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 ARID4AP29374 1257 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 FAM182BQ5T319 152 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 CDC37L1Q7L3B6 337 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 AMIGO3Q86WK7 504 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 APPBP2Q92624 585 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 SMARCC1Q92922 1105 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 BRF1Q92994 677 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 GTF3C6Q969F1 213 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 TCRBV5S4A2TA0A5A2 114 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 ZFYP08048 801 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 ADD2P35612 726 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 SCRN1Q12765 414 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 PUM3Q15397 648 aaKnown RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 PARP10Q53GL7 1025 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 LPIN2Q92539 896 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
LINC02239-201ENST00000504339 TCHHQ07283 1943 aa10.75□□□□□ -0.69
LINC02239-201ENST00000504339 CTDNEP1O95476 244 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 WASHC4Q2M389 1173 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 RBSNQ9H1K0 784 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 MROH5Q6ZUA9 1318 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 EP400Q96L91 3159 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 GPAA1O43292 621 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
LINC02239-201ENST00000504339 HAND2P61296 217 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
LINC02239-201ENST00000504339 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 DENND2AQ9ULE3 1009 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 RTL9Q8NET4 1388 aa10.74□□□□□ -0.69
LINC02239-201ENST00000504339 SYCE3A1L190 88 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 MBD3O95983 291 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 APOBRQ0VD83 1088 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 RASGRF1Q13972 1273 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 LAMA4Q16363 1823 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 VPS37CA5D8V6 355 aaPredicted RBP10.73□□□□□ -0.69
LINC02239-201ENST00000504339 PFKFB2O60825 505 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 CLEC4GQ6UXB4 293 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
LINC02239-201ENST00000504339 HMGB1P09429 215 aaKnown RBP10.72□□□□□ -0.69
LINC02239-201ENST00000504339 PDE6AP16499 860 aa10.72□□□□□ -0.69
LINC02239-201ENST00000504339 BCAMP50895 628 aa10.72□□□□□ -0.69
LINC02239-201ENST00000504339 ANTXR2P58335 489 aa10.72□□□□□ -0.69
LINC02239-201ENST00000504339 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
LINC02239-201ENST00000504339 FBXL16Q8N461 479 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms