RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
POLR2J3-209ENST00000504157 DRC1Q96MC2 740 aa20.71■□□□□ 0.91
POLR2J3-209ENST00000504157 DEF6Q9H4E7 631 aa20.71■□□□□ 0.91
POLR2J3-209ENST00000504157 ACEP12821 1306 aa20.71■□□□□ 0.91
POLR2J3-209ENST00000504157 SFPQP23246 707 aaKnown RBP eCLIP20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 EYA1Q99502 592 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 TOMM22Q9NS69 142 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 RCOR1Q9UKL0 485 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 EIF3CLB5ME19 914 aaKnown RBP20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 APPP05067 770 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 ATL3Q6DD88 541 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 EIF3CQ99613 913 aaKnown RBP20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 LMTK3Q96Q04 1460 aa20.7■□□□□ 0.9
POLR2J3-209ENST00000504157 H3BQF6 201 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 HOXB7P09629 217 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 NMIQ13287 307 aaPredicted RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 OS9Q13438 667 aaPredicted RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 SWT1Q5T5J6 900 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 CEP57L1Q8IYX8 460 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 DDX54Q8TDD1 881 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 ZNF622Q969S3 477 aaKnown RBP eCLIP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 PLEKHG1Q9ULL1 1385 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 PTPRUQ92729 1446 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 URI1O94763 535 aaPredicted RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 NAT10Q9H0A0 1025 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-209ENST00000504157 MAP2K7O14733 419 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 CORO7P57737 925 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 KRT32Q14532 448 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 BRF1Q92994 677 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 FANCGO15287 622 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 SMC2O95347 1197 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 ADD1P35611 737 aaKnown RBP20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 RSRC2Q7L4I2 434 aaKnown RBP20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 AOPEPQ8N6M6 819 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 FAM227BQ96M60 508 aa20.68■□□□□ 0.9
POLR2J3-209ENST00000504157 CPP00450 1065 aa20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 COL9A3Q14050 684 aaPredicted RBP20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 NAA16Q6N069 864 aaPredicted RBP20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 ENGASEQ8NFI3 743 aa20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 BPIFA3Q9BQP9 254 aa20.67■□□□□ 0.9
POLR2J3-209ENST00000504157 GSCP56915 257 aaPredicted RBP20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 PSME1Q06323 249 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 JAKMIP3Q5VZ66 844 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 CCDC73Q6ZRK6 1079 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 CCAR1Q8IX12 1150 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 MKRN1Q9UHC7 482 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 FAM160A1Q05DH4 1040 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 CCDC91Q7Z6B0 441 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 RABGGTAQ92696 567 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 LLPHQ9BRT6 129 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 PARD6BQ9BYG5 372 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 CEP83Q9Y592 693 aa20.66■□□□□ 0.9
POLR2J3-209ENST00000504157 KINO60870 393 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 CCDC172P0C7W6 258 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 DIP2AQ14689 1571 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 CT47A1Q5JQC4 288 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 TMC6Q7Z403 805 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 MSL3Q8N5Y2 521 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 SMARCC2Q8TAQ2 1214 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 EPC1Q9H2F5 836 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 H3BQV1 296 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 JAK2O60674 1132 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 LONRF2Q1L5Z9 754 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 IFFO2Q5TF58 517 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 GPATCH11Q8N954 259 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 GOLPH3LQ9H4A5 285 aa20.65■□□□□ 0.9
POLR2J3-209ENST00000504157 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 CCDC151A5D8V7 595 aa20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 MYCNP04198 464 aaPredicted RBP20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 XPO4Q9C0E2 1151 aaKnown RBP20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 MYH15Q9Y2K3 1946 aa20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 NWD1Q149M9 1564 aa20.64■□□□□ 0.89
POLR2J3-209ENST00000504157 A0A0D9SFI3 127 aa20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 PRR29P0C7W0 189 aa20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 MAP3K9P80192 1104 aa20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 MED1Q15648 1581 aaPredicted RBP20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 SART3Q15020 963 aaKnown RBP20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 BRD3Q15059 726 aa20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 MCTP2Q6DN12 878 aa20.63■□□□□ 0.89
POLR2J3-209ENST00000504157 APOBRQ0VD83 1088 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 FOXR1Q6PIV2 292 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 MMS22LQ6ZRQ5 1243 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 AACSQ86V21 672 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 CEP89Q96ST8 783 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 PI4KAP2A4QPH2 592 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 ALDH1L1O75891 902 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 STK3Q13188 491 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 PI4KAP1Q8N8J0 262 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 IFNKQ9P0W0 207 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 TAF6LQ9Y6J9 622 aa20.62■□□□□ 0.89
POLR2J3-209ENST00000504157 ZNF396Q96N95 335 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 VPS18Q9P253 973 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms