RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 CRAMP1Q96RY5 1269 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 IRF6O14896 467 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 HSPA6P17066 643 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
SSBP2-202ENST00000504136 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 WWC1Q8IX03 1113 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 PSMD1Q99460 953 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 ISCA1Q9BUE6 129 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 UTP14AQ9BVJ6 771 aaKnown RBP11.48□□□□□ -0.57
SSBP2-202ENST00000504136 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
SSBP2-202ENST00000504136 CACNA1FO60840 1977 aa11.48□□□□□ -0.57
SSBP2-202ENST00000504136 DNAJB2P25686 324 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 GTF2E1P29083 439 aaPredicted RBP11.47□□□□□ -0.57
SSBP2-202ENST00000504136 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 MRS2Q9HD23 443 aa11.47□□□□□ -0.57
SSBP2-202ENST00000504136 SCN4AP35499 1836 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 POTECB2RU33 542 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 FSTL1Q12841 308 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.57
SSBP2-202ENST00000504136 C8orf58Q8NAV2 365 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.46□□□□□ -0.57
SSBP2-202ENST00000504136 HCSTQ9UBK5 93 aa11.46□□□□□ -0.57
SSBP2-202ENST00000504136 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
SSBP2-202ENST00000504136 AIMP1Q12904 312 aaKnown RBP11.45□□□□□ -0.58
SSBP2-202ENST00000504136 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
SSBP2-202ENST00000504136 COL4A5P29400 1685 aa11.45□□□□□ -0.58
SSBP2-202ENST00000504136 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
SSBP2-202ENST00000504136 LTBP1Q14766 1721 aa11.44□□□□□ -0.58
SSBP2-202ENST00000504136 VEGFAP15692 232 aaPredicted RBP11.44□□□□□ -0.58
SSBP2-202ENST00000504136 CCDC30Q5VVM6 783 aa11.44□□□□□ -0.58
SSBP2-202ENST00000504136 WDR63Q8IWG1 891 aa11.44□□□□□ -0.58
SSBP2-202ENST00000504136 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
SSBP2-202ENST00000504136 RBM17Q96I25 401 aaKnown RBP11.44□□□□□ -0.58
SSBP2-202ENST00000504136 DUOX1Q9NRD9 1551 aa11.44□□□□□ -0.58
SSBP2-202ENST00000504136 ABCC4O15439 1325 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 FZD9O00144 591 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 SF3B3Q15393 1217 aaKnown RBP11.43□□□□□ -0.58
SSBP2-202ENST00000504136 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 TSPYL6Q8N831 410 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
SSBP2-202ENST00000504136 VPS33BQ9H267 617 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
SSBP2-202ENST00000504136 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 PPEF1O14829 653 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-202ENST00000504136 BBOX1O75936 387 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
SSBP2-202ENST00000504136 PTPN5P54829 565 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 TMC4Q7Z404 712 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
SSBP2-202ENST00000504136 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
SSBP2-202ENST00000504136 ATP6V0A2Q9Y487 856 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 COL4A1P02462 1669 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 TAF1P21675 1872 aa11.42□□□□□ -0.58
SSBP2-202ENST00000504136 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 APLP1P51693 650 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 GRAPQ13588 217 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 SP8Q8IXZ3 490 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 CCDC191Q8NCU4 936 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
SSBP2-202ENST00000504136 TSR2Q969E8 191 aaKnown RBP11.41□□□□□ -0.58
SSBP2-202ENST00000504136 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
SSBP2-202ENST00000504136 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
SSBP2-202ENST00000504136 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
SSBP2-202ENST00000504136 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
SSBP2-202ENST00000504136 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
SSBP2-202ENST00000504136 HCLS1P14317 486 aaPredicted RBP11.4□□□□□ -0.58
SSBP2-202ENST00000504136 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
SSBP2-202ENST00000504136 C16orf71Q8IYS4 520 aaPredicted RBP11.4□□□□□ -0.58
SSBP2-202ENST00000504136 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
SSBP2-202ENST00000504136 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
SSBP2-202ENST00000504136 NLRP7Q8WX94 980 aa11.4□□□□□ -0.58
SSBP2-202ENST00000504136 MYH3P11055 1940 aa11.4□□□□□ -0.58
SSBP2-202ENST00000504136 CDHR2Q9BYE9 1310 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-202ENST00000504136 DDX58O95786 925 aaKnown RBP11.39□□□□□ -0.59
SSBP2-202ENST00000504136 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-202ENST00000504136 DDX46Q7L014 1031 aaKnown RBP11.39□□□□□ -0.59
SSBP2-202ENST00000504136 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 SLC51AQ86UW1 340 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
SSBP2-202ENST00000504136 IQCA1LA6NCM1 817 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms