RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 UNC45AQ9H3U1 944 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 A1CFQ9NQ94 594 aaKnown RBP7.62□□□□□ -1.19
CLCN3-203ENST00000502998 IGSF5Q9NSI5 407 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 FAM53CQ9NYF3 392 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 WWC3Q9ULE0 1092 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 UTRNP46939 3433 aa7.62□□□□□ -1.19
CLCN3-203ENST00000502998 BLMP54132 1417 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 KDRP35968 1356 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 PLEKHG2Q9H7P9 1386 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 CGNL1Q0VF96 1302 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 PSDA5PKW4 1024 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 CTIFO43310 598 aaKnown RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 NUCB2P80303 420 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 SART3Q15020 963 aaKnown RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 LARP1BQ659C4 914 aaKnown RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 NAIF1Q69YI7 327 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 HSCBQ8IWL3 235 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 C10orf67Q8IYJ2 551 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 CCDC191Q8NCU4 936 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 CCDC47Q96A33 483 aaKnown RBP7.61□□□□□ -1.19
CLCN3-203ENST00000502998 SPOCK3Q9BQ16 436 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 NRBP1Q9UHY1 535 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 PCDHB8Q9UN66 801 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 RALGAPBQ86X10 1494 aa7.61□□□□□ -1.19
CLCN3-203ENST00000502998 KIF1AQ12756 1690 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 DHX57Q6P158 1386 aaKnown RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ERLIN1O75477 346 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 CCDC159P0C7I6 412 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 U2AF1L5P0DN76 240 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 HARSP12081 509 aaKnown RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ATICP31939 592 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 U2AF1Q01081 240 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 DEUP1Q05D60 604 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 GPS2Q13227 327 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 PRPF4BQ13523 1007 aaKnown RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 E2F5Q15329 346 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 RNF20Q5VTR2 975 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 TTC19Q6DKK2 380 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 CCDC70Q6NSX1 233 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 C3orf67Q6ZVT6 689 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 SRLQ86TD4 932 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 IQUBQ8NA54 791 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 RNF214Q8ND24 703 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 MIPOL1Q8TD10 442 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 BICD1Q96G01 975 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 L3MBTL3Q96JM7 780 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ANTXR1Q9H6X2 564 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ODF2LQ9ULJ1 636 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 RABL2BQ9UNT1 228 aa7.6□□□□□ -1.19
CLCN3-203ENST00000502998 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 RGPD8O14715 1765 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 MARF1Q9Y4F3 1742 aaKnown RBP7.6□□□□□ -1.19
CLCN3-203ENST00000502998 ADGRB1O14514 1584 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 SLIT2O94813 1529 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 F8VZ95 297 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 NEBLO76041 1014 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 IGHDP01880 384 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 FOSL1P15407 271 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 XBP1P17861 261 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 GJA8P48165 433 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 SLC4A3P48751 1232 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 FOSBP53539 338 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 SAFB2Q14151 953 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLCN3-203ENST00000502998 CRYMQ14894 314 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 DBN1Q16643 649 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 CCDC80Q76M96 950 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 TRIM42Q8IWZ5 723 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 MIGA1Q8NAN2 632 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 PMFBP1Q8TBY8 1022 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 TCP11Q8WWU5 503 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 PRAM1Q96QH2 718 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 HS3ST6Q96QI5 342 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 SEZ6LQ9BYH1 1024 aa7.59□□□□□ -1.19
CLCN3-203ENST00000502998 DLC1Q96QB1 1528 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 SOS1Q07889 1333 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-203ENST00000502998 NAT2P11245 290 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 DCTN1Q14203 1278 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 COL19A1Q14993 1142 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 C4orf46Q504U0 113 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 CCDC184Q52MB2 194 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 SYT10Q6XYQ8 523 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 SYNE3Q6ZMZ3 975 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 KRT28Q7Z3Y7 464 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 SDCCAG8Q86SQ7 713 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-203ENST00000502998 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 PMM1Q92871 262 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 TRIM6Q9C030 488 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-203ENST00000502998 BARX2Q9UMQ3 279 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-203ENST00000502998 ATP8A1Q9Y2Q0 1164 aa7.58□□□□□ -1.2
CLCN3-203ENST00000502998 V9GYY5 206 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-203ENST00000502998 SPATA31A3Q5VYP0 1347 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 USP32Q8NFA0 1604 aa7.57□□□□□ -1.2
CLCN3-203ENST00000502998 POTEB3A0JP26 581 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms