RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 FILIP1Q7Z7B0 1213 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 HELBQ8NG08 1087 aaPredicted RBP17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 ZNF396Q96N95 335 aaPredicted RBP17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 RXRAP19793 462 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 PDE4CQ08493 712 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 ZSCAN16Q9H4T2 348 aaPredicted RBP17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 HELLSQ9NRZ9 838 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 MAST3O60307 1309 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 COL15A1P39059 1388 aa17.6■□□□□ 0.41
SH3TC1-206ENST00000502669 ZAP70P43403 619 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 PIBF1Q8WXW3 757 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 M0R2C6 588 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 AP5Z1O43299 807 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 OSBP2Q969R2 916 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 AKAP2Q9Y2D5 859 aa17.59■□□□□ 0.41
SH3TC1-206ENST00000502669 NSUN7Q8NE18 718 aaKnown RBP17.58■□□□□ 0.41
SH3TC1-206ENST00000502669 C8orf76Q96K31 380 aa17.58■□□□□ 0.41
SH3TC1-206ENST00000502669 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.41
SH3TC1-206ENST00000502669 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 ORC3Q9UBD5 711 aaPredicted RBP17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
SH3TC1-206ENST00000502669 BIN1O00499 593 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 ZNF213O14771 459 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 C16orf45Q96MC5 204 aaPredicted RBP17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 CHD2O14647 1828 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 PRC1O43663 620 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 STARD3NLO95772 234 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 LRMPQ12912 555 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 RESTQ13127 1097 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 LRP10Q7Z4F1 713 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 CLIP2Q9UDT6 1046 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 NRBP1Q9UHY1 535 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 GJB4Q9NTQ9 266 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 OVOS2A0A0G2JMS6 1433 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 KDM3BQ7LBC6 1761 aa17.57■□□□□ 0.4
SH3TC1-206ENST00000502669 PFKFB2O60825 505 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 PDCL3Q9H2J4 239 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 A0A1B0GVL5 298 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 SCARF1Q14162 830 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 SLC9C2Q5TAH2 1124 aa17.56■□□□□ 0.4
SH3TC1-206ENST00000502669 ELP1O95163 1332 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 CASP7P55210 303 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 WDR17Q8IZU2 1322 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 TCIRG1Q13488 830 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 TSGA10IPQ3SY00 556 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 FUCA2Q9BTY2 467 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 FGAP02671 866 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
SH3TC1-206ENST00000502669 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 SH3TC1Q8TE82 1336 aa17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 TPM3P06753 285 aa17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
SH3TC1-206ENST00000502669 GPAA1O43292 621 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 ATP2B1P20020 1258 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 ITGA6P23229 1130 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 PUS7LQ9H0K6 701 aaKnown RBP17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 LMO7Q8WWI1 1683 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 DYNC1I1O14576 645 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 ANKRD18BA2A2Z9 1011 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
SH3TC1-206ENST00000502669 MARCKSP29966 332 aaPredicted RBP17.52■□□□□ 0.4
SH3TC1-206ENST00000502669 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
SH3TC1-206ENST00000502669 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
SH3TC1-206ENST00000502669 GREM2Q9H772 168 aa17.52■□□□□ 0.4
SH3TC1-206ENST00000502669 SMC2O95347 1197 aa17.52■□□□□ 0.39
SH3TC1-206ENST00000502669 CPLX2Q6PUV4 134 aaKnown RBP17.52■□□□□ 0.39
SH3TC1-206ENST00000502669 SLIT3O75094 1523 aa17.52■□□□□ 0.39
SH3TC1-206ENST00000502669 RGPD5Q99666 1765 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 CTDNEP1O95476 244 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 HLFQ16534 295 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 STX1AQ16623 288 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 CEP57L1Q8IYX8 460 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 AOPEPQ8N6M6 819 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
SH3TC1-206ENST00000502669 SNAP23O00161 211 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms