RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GAS2L1Q99501 681 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 GGNBP2Q9H3C7 697 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 BCS1LQ9Y276 419 aa5.75□□□□□ -1.49
HMGB1P21-201ENST00000502313 FHAD1B1AJZ9 1412 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 FIGNL2A6NMB9 653 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 GIPC1O14908 333 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 XYLBO75191 536 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 TNFRSF21O75509 655 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 ATF4P18848 351 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 ATP4AP20648 1035 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 RHBDL3P58872 404 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 PKDCCQ504Y2 493 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 JDP2Q8WYK2 163 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 PNMA5Q96PV4 448 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 IRX2Q9BZI1 471 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 ELP3Q9H9T3 547 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 TERF2IPQ9NYB0 399 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 GRIN2AQ12879 1464 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 PBRM1Q86U86 1689 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 RIMBP3CA6NJZ7 1639 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 RIMBP3BA6NNM3 1639 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 RIMBP3Q9UFD9 1639 aa5.74□□□□□ -1.49
HMGB1P21-201ENST00000502313 ARAP1Q96P48 1450 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 PHF20L1A8MW92 1017 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 MAN1A2O60476 641 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 PPFIA4O75335 1185 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 F11P03951 625 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 BMP1P13497 986 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 TBX4P57082 545 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 SERINC3Q13530 473 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 FIGNL1Q6PIW4 674 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 RIPOR1Q6ZS17 1223 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 CKAP2LQ8IYA6 745 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 PMEPA1Q969W9 287 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 SGSM3Q96HU1 749 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 ZIC5Q96T25 663 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 RUBCNLQ9H714 662 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 BRD7Q9NPI1 651 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 FOXD3Q9UJU5 478 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 USP20Q9Y2K6 914 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 AK5Q9Y6K8 562 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 SHROOM2Q13796 1616 aa5.73□□□□□ -1.49
HMGB1P21-201ENST00000502313 CEP170Q5SW79 1584 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 OPLAHO14841 1288 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 PDGFRBP09619 1106 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 PAX3P23760 479 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 INPP5BP32019 993 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 TYRO3Q06418 890 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 PAK2Q13177 524 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 CTC1Q2NKJ3 1217 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 CCDC74AQ96AQ1 378 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 SRCIN1Q9C0H9 1055 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 UBA5Q9GZZ9 404 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 C12orf49Q9H741 205 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 ABI2Q9NYB9 513 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 FAM8A1Q9UBU6 413 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 DYRK1BQ9Y463 629 aa5.72□□□□□ -1.49
HMGB1P21-201ENST00000502313 AXIN1O15169 862 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 CES1P23141 567 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 BIRC2Q13490 618 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 TSHZ1Q6ZSZ6 1077 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 TRIM67Q6ZTA4 783 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 NLRP13Q86W25 1043 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 NLRP8Q86W28 1048 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 SRPK1Q96SB4 655 aaKnown RBP5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 IER2Q9BTL4 223 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 CRISPLD1Q9H336 500 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 GGT7Q9UJ14 662 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 PNMA2Q9UL42 364 aa5.71□□□□□ -1.5
HMGB1P21-201ENST00000502313 PRC1O43663 620 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 SH3BP5O60239 455 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 EDN3P14138 238 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 GJA8P48165 433 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 CHMP4BP1P59074 171 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 PTPN12Q05209 780 aaKnown RBP5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 NEUROD1Q13562 356 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 LBRQ14739 615 aaKnown RBP5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 TRIP4Q15650 581 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 XKR5Q6UX68 686 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 MKL1Q969V6 931 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 CCDC136Q96JN2 1154 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 RPS6KC1Q96S38 1066 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 CFHR5Q9BXR6 569 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 ZFYVE28Q9HCC9 887 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 NPHS2Q9NP85 383 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 PRDM10Q9NQV6 1147 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 TTF2Q9UNY4 1162 aaKnown RBP5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 TRAK1Q9UPV9 953 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 KCNH4Q9UQ05 1017 aa5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 LAS1LQ9Y4W2 734 aaKnown RBP5.7□□□□□ -1.5
HMGB1P21-201ENST00000502313 SOS2Q07890 1332 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms