RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 PTPN18Q99952 460 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 CENPFP49454 3210 aa11.89□□□□□ -0.51
FAM3D-205ENST00000498347 UBE2Q1Q7Z7E8 422 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
FAM3D-205ENST00000498347 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
FAM3D-205ENST00000498347 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
FAM3D-205ENST00000498347 UFL1O94874 794 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 GNRH1P01148 92 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 PRMT2P55345 433 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 KIF22Q14807 665 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
FAM3D-205ENST00000498347 ANKRD36CQ5JPF3 1778 aa11.87□□□□□ -0.51
FAM3D-205ENST00000498347 EVI5O60447 810 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 GJB1P08034 283 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 BMP8BP34820 402 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 GJA8P48165 433 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 FZD1Q9UP38 647 aa11.86□□□□□ -0.51
FAM3D-205ENST00000498347 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 TAF1P21675 1872 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 PDIA6Q15084 440 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 MTFR1Q15390 333 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 SUPT20HL1Q3ZLR7 823 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 Q7L0L9 218 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 LRP10Q7Z4F1 713 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 DEFB129Q9H1M3 183 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 BRCA2P51587 3418 aa11.85□□□□□ -0.51
FAM3D-205ENST00000498347 KDM3BQ7LBC6 1761 aa11.84□□□□□ -0.51
FAM3D-205ENST00000498347 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
FAM3D-205ENST00000498347 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
FAM3D-205ENST00000498347 TAF1CQ15572 869 aaPredicted RBP11.84□□□□□ -0.51
FAM3D-205ENST00000498347 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
FAM3D-205ENST00000498347 SASH1O94885 1247 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 CAPN2P17655 700 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
FAM3D-205ENST00000498347 GJA5P36382 358 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 IREB2P48200 963 aaKnown RBP11.83□□□□□ -0.52
FAM3D-205ENST00000498347 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
FAM3D-205ENST00000498347 LRIT3Q3SXY7 679 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 DACT2Q5SW24 774 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.52
FAM3D-205ENST00000498347 USP2O75604 605 aaPredicted RBP11.82□□□□□ -0.52
FAM3D-205ENST00000498347 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 HOXD10P28358 340 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
FAM3D-205ENST00000498347 STRIP1Q5VSL9 837 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 GDF15Q99988 308 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 RNF208Q9H0X6 261 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
FAM3D-205ENST00000498347 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 FARP2O94887 1054 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 HSPA5P11021 654 aaKnown RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 CCL5P13501 91 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 COL9A1P20849 921 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 XAGE3Q8WTP9 111 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 ZBED3Q96IU2 234 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-205ENST00000498347 CFAP53Q96M91 514 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 LAMB2P55268 1798 aa11.81□□□□□ -0.52
FAM3D-205ENST00000498347 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
FAM3D-205ENST00000498347 TLR2O60603 784 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 ANXA1P04083 346 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 GRK4P32298 578 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 GTF2A2P52657 109 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 ARHGAP39Q9C0H5 1083 aa11.8□□□□□ -0.52
FAM3D-205ENST00000498347 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
FAM3D-205ENST00000498347 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
FAM3D-205ENST00000498347 SGPL1O95470 568 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 HSP90B1P14625 803 aaKnown RBP11.79□□□□□ -0.52
FAM3D-205ENST00000498347 BCAMP50895 628 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 UBXN2AP68543 259 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 TTLL5Q6EMB2 1281 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 RAET1EQ8TD07 263 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
FAM3D-205ENST00000498347 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 OPTNQ96CV9 577 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 SRRDQ9UH36 339 aa11.79□□□□□ -0.52
FAM3D-205ENST00000498347 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms