RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 RRAGCQ9HB90 399 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 ZNF358Q9NW07 568 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 MYBBP1AQ9BQG0 1328 aaKnown RBP6.39□□□□□ -1.39
CMSS1-209ENST00000497345 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 ATAD2Q6PL18 1390 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 FAM135BQ49AJ0 1406 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 CPS1P31327 1500 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 KNDC1Q76NI1 1749 aa6.39□□□□□ -1.39
CMSS1-209ENST00000497345 ITGB2P05107 769 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 ARAFP10398 606 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 MAPTP10636 758 aaKnown RBP6.38□□□□□ -1.39
CMSS1-209ENST00000497345 PSME1Q06323 249 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 SLCO4C1Q6ZQN7 724 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 DEPDC4Q8N2C3 294 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 NGDNQ8NEJ9 315 aaKnown RBP6.38□□□□□ -1.39
CMSS1-209ENST00000497345 BTBD6Q96KE9 485 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 SCHIP1Q9P0W5 487 aaPredicted RBP6.38□□□□□ -1.39
CMSS1-209ENST00000497345 PARP3Q9Y6F1 533 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 A0A1W2PP64 1363 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 TECPR2O15040 1411 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 DIP2AQ14689 1571 aa6.38□□□□□ -1.39
CMSS1-209ENST00000497345 LMTK3Q96Q04 1460 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 ANKRD36BQ8N2N9 1353 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 PARD3Q8TEW0 1356 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 CGNL1Q0VF96 1302 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 DCDC2BA2VCK2 349 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 NEURL1BA8MQ27 555 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 USP17L5A8MUK1 530 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 MSTNO14793 375 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
CMSS1-209ENST00000497345 PPM1GO15355 546 aaPredicted RBP6.37□□□□□ -1.39
CMSS1-209ENST00000497345 EPXP11678 715 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
CMSS1-209ENST00000497345 AMPD1P23109 780 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 FBLN1P23142 703 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 XPCQ01831 940 aaPredicted RBP6.37□□□□□ -1.39
CMSS1-209ENST00000497345 FAM182BQ5T319 152 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 NUTM2GQ5VZR2 741 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 LINC00114Q6XXX2 140 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 NME9Q86XW9 330 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 HCN2Q9UL51 889 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 GJA3Q9Y6H8 435 aa6.37□□□□□ -1.39
CMSS1-209ENST00000497345 CHD2O14647 1828 aaKnown RBP6.36□□□□□ -1.39
CMSS1-209ENST00000497345 XRN1Q8IZH2 1706 aaKnown RBP6.36□□□□□ -1.39
CMSS1-209ENST00000497345 ACEP12821 1306 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 POM121CA8CG34 1229 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 ZBTB7BO15156 539 aaPredicted RBP6.36□□□□□ -1.39
CMSS1-209ENST00000497345 NOS2P35228 1153 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 TXLNAP40222 546 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 TEAD4Q15561 434 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 HDGFL1Q5TGJ6 251 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 BICDL1Q6ZP65 573 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 NLRP13Q86W25 1043 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 TRIM50Q86XT4 487 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 ADAMTS19Q8TE59 1207 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 PUS7Q96PZ0 661 aaKnown RBP6.36□□□□□ -1.39
CMSS1-209ENST00000497345 SPOCK3Q9BQ16 436 aa6.36□□□□□ -1.39
CMSS1-209ENST00000497345 RGPD8O14715 1765 aaPredicted RBP6.36□□□□□ -1.39
CMSS1-209ENST00000497345 PTCH1Q13635 1447 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 PIK3R4Q99570 1358 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 ZNF335Q9H4Z2 1342 aaPredicted RBP6.35□□□□□ -1.39
CMSS1-209ENST00000497345 FYB1O15117 783 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 CD33P20138 364 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 EPHA4P54764 986 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 WDR43Q15061 677 aaKnown RBP eCLIP6.35□□□□□ -1.39
CMSS1-209ENST00000497345 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 ALYREFQ86V81 257 aaKnown RBP6.35□□□□□ -1.39
CMSS1-209ENST00000497345 CCDC146Q8IYE0 955 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 TNS4Q8IZW8 715 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 PNISRQ8TF01 805 aaKnown RBP6.35□□□□□ -1.39
CMSS1-209ENST00000497345 ZDHHC1Q8WTX9 485 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 AVENQ9NQS1 362 aaPredicted RBP6.35□□□□□ -1.39
CMSS1-209ENST00000497345 KLF15Q9UIH9 416 aa6.35□□□□□ -1.39
CMSS1-209ENST00000497345 CD163L1Q9NR16 1453 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 TMEM94Q12767 1356 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 KRBA1A5PL33 1030 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 FAM157BP0CG42 384 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 ATF3P18847 181 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 COL8A1P27658 744 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 ADH6P28332 368 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 MTHFSP49914 203 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 SLC9A9Q8IVB4 645 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 DDX17Q92841 729 aaKnown RBP6.34□□□□□ -1.39
CMSS1-209ENST00000497345 ORAI2Q96SN7 254 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 MARK1Q9P0L2 795 aa6.34□□□□□ -1.39
CMSS1-209ENST00000497345 ATP7BP35670 1465 aa6.34□□□□□ -1.4
CMSS1-209ENST00000497345 STRCQ7RTU9 1775 aa6.34□□□□□ -1.4
CMSS1-209ENST00000497345 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 NALCNQ8IZF0 1738 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 BRD4O60885 1362 aaPredicted RBP6.33□□□□□ -1.4
CMSS1-209ENST00000497345 NINLQ9Y2I6 1382 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 EML1O00423 815 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 PIK3R2O00459 728 aa6.33□□□□□ -1.4
CMSS1-209ENST00000497345 U2SURPO15042 1029 aaKnown RBP6.33□□□□□ -1.4
CMSS1-209ENST00000497345 PROCP04070 461 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms