RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 SCARF1Q14162 830 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 KRT32Q14532 448 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 NFKBIBQ15653 356 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 ZSWIM6Q9HCJ5 1215 aa18.26■□□□□ 0.51
COL15A1-204ENST00000496686 RPAP1Q9BWH6 1393 aaPredicted RBP18.26■□□□□ 0.51
COL15A1-204ENST00000496686 CUL4AQ13619 759 aa18.25■□□□□ 0.51
COL15A1-204ENST00000496686 SPRYD3Q8NCJ5 442 aa18.25■□□□□ 0.51
COL15A1-204ENST00000496686 TTC14Q96N46 770 aa18.25■□□□□ 0.51
COL15A1-204ENST00000496686 ZBTB22O15209 634 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 GYS1P13807 737 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 PHKA1P46020 1223 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
COL15A1-204ENST00000496686 APPBP2Q92624 585 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
COL15A1-204ENST00000496686 TMX3Q96JJ7 454 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 RGPD3A6NKT7 1758 aaPredicted RBP18.24■□□□□ 0.51
COL15A1-204ENST00000496686 RGPD4Q7Z3J3 1758 aa18.24■□□□□ 0.51
COL15A1-204ENST00000496686 MAST3O60307 1309 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 CASZ1Q86V15 1759 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
COL15A1-204ENST00000496686 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 PROM2Q8N271 834 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 JAKMIP1Q96N16 626 aaKnown RBP18.23■□□□□ 0.51
COL15A1-204ENST00000496686 UPF3BQ9BZI7 483 aaKnown RBP18.23■□□□□ 0.51
COL15A1-204ENST00000496686 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
COL15A1-204ENST00000496686 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
COL15A1-204ENST00000496686 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 AKAP11Q9UKA4 1901 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 TM4SF1P30408 202 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 NBR1Q14596 966 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
COL15A1-204ENST00000496686 MINPP1Q9UNW1 487 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 ZNF804BA4D1E1 1349 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 COL4A1P02462 1669 aa18.22■□□□□ 0.51
COL15A1-204ENST00000496686 NPHP1O15259 732 aa18.21■□□□□ 0.51
COL15A1-204ENST00000496686 CYP2E1P05181 493 aaPredicted RBP18.21■□□□□ 0.51
COL15A1-204ENST00000496686 CASTP20810 708 aaKnown RBP18.21■□□□□ 0.51
COL15A1-204ENST00000496686 ADD2P35612 726 aa18.21■□□□□ 0.51
COL15A1-204ENST00000496686 RUFY3Q7L099 469 aa18.21■□□□□ 0.51
COL15A1-204ENST00000496686 SPATA5Q8NB90 893 aa18.21■□□□□ 0.51
COL15A1-204ENST00000496686 CELF1Q92879 486 aaKnown RBP18.21■□□□□ 0.51
COL15A1-204ENST00000496686 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
COL15A1-204ENST00000496686 TNRC6CQ9HCJ0 1690 aaKnown RBP18.2■□□□□ 0.5
COL15A1-204ENST00000496686 APBA3O96018 575 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 ST5P78524 1137 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 NUCB2P80303 420 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 AKT1S1Q96B36 256 aa18.2■□□□□ 0.5
COL15A1-204ENST00000496686 M0R2C6 588 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 SEMA3EO15041 775 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 RASGRF1Q13972 1273 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 PI16Q6UXB8 463 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 ZSCAN31Q96LW9 406 aaPredicted RBP18.19■□□□□ 0.5
COL15A1-204ENST00000496686 PIH1D3Q9NQM4 214 aaKnown RBP18.19■□□□□ 0.5
COL15A1-204ENST00000496686 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 LIMCH1Q9UPQ0 1083 aa18.19■□□□□ 0.5
COL15A1-204ENST00000496686 PDS5AQ29RF7 1337 aaKnown RBP18.19■□□□□ 0.5
COL15A1-204ENST00000496686 CHGBP05060 677 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 SERPINB2P05120 415 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 HSPD1P10809 573 aaKnown RBP18.18■□□□□ 0.5
COL15A1-204ENST00000496686 AK2P54819 239 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 GRAPQ13588 217 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 ANKRD1Q15327 319 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
COL15A1-204ENST00000496686 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
COL15A1-204ENST00000496686 SH2B1Q9NRF2 756 aaPredicted RBP18.18■□□□□ 0.5
COL15A1-204ENST00000496686 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
COL15A1-204ENST00000496686 MYH7P12883 1935 aa18.17■□□□□ 0.5
COL15A1-204ENST00000496686 HMGB1P09429 215 aaKnown RBP18.17■□□□□ 0.5
COL15A1-204ENST00000496686 RPS6KB1P23443 525 aa18.17■□□□□ 0.5
COL15A1-204ENST00000496686 MAP3K12Q12852 859 aa18.17■□□□□ 0.5
COL15A1-204ENST00000496686 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
COL15A1-204ENST00000496686 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
COL15A1-204ENST00000496686 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 IGSF3O75054 1194 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 PDE6AP16499 860 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 BCAMP50895 628 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 SLC9C2Q5TAH2 1124 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 FBXO41Q8TF61 875 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
COL15A1-204ENST00000496686 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
COL15A1-204ENST00000496686 SNAP23O00161 211 aa18.15■□□□□ 0.5
COL15A1-204ENST00000496686 POLRMTO00411 1230 aaKnown RBP18.15■□□□□ 0.5
COL15A1-204ENST00000496686 FRAT2O75474 233 aaPredicted RBP18.15■□□□□ 0.5
COL15A1-204ENST00000496686 IDH1O75874 414 aaKnown RBP18.15■□□□□ 0.5
COL15A1-204ENST00000496686 CYP21A2P08686 494 aa18.15■□□□□ 0.5
COL15A1-204ENST00000496686 ZNF827Q17R98 1081 aa18.15■□□□□ 0.5
COL15A1-204ENST00000496686 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
COL15A1-204ENST00000496686 CLEC17AQ6ZS10 378 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms