RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 DZANK1Q9NVP4 752 aa9.6□□□□□ -0.87
NCL-210ENST00000494618 C9orf172C9J069 976 aa9.59□□□□□ -0.87
NCL-210ENST00000494618 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
NCL-210ENST00000494618 CPNE3O75131 537 aaKnown RBP9.59□□□□□ -0.87
NCL-210ENST00000494618 BAG6P46379 1132 aa9.59□□□□□ -0.87
NCL-210ENST00000494618 GRIK4Q16099 956 aa9.59□□□□□ -0.87
NCL-210ENST00000494618 FBXO11Q86XK2 927 aa9.59□□□□□ -0.87
NCL-210ENST00000494618 MAP4K3Q8IVH8 894 aa9.59□□□□□ -0.87
NCL-210ENST00000494618 POP1Q99575 1024 aaKnown RBP9.59□□□□□ -0.87
NCL-210ENST00000494618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.59□□□□□ -0.87
NCL-210ENST00000494618 C1QTNF9BB2RNN3 333 aa9.58□□□□□ -0.88
NCL-210ENST00000494618 MSTNO14793 375 aa9.58□□□□□ -0.88
NCL-210ENST00000494618 CABP4P57796 275 aa9.58□□□□□ -0.88
NCL-210ENST00000494618 FAM117BQ6P1L5 589 aa9.58□□□□□ -0.88
NCL-210ENST00000494618 ALKBH8Q96BT7 664 aaKnown RBP9.58□□□□□ -0.88
NCL-210ENST00000494618 DNAJC25Q9H1X3 360 aa9.58□□□□□ -0.88
NCL-210ENST00000494618 GPR182O15218 404 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 ACPPP15309 386 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 NRG1Q02297 640 aaPredicted RBP9.57□□□□□ -0.88
NCL-210ENST00000494618 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 CD163Q86VB7 1156 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
NCL-210ENST00000494618 GALNT12Q8IXK2 581 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 TMEM102Q8N9M5 508 aaPredicted RBP9.57□□□□□ -0.88
NCL-210ENST00000494618 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
NCL-210ENST00000494618 NFKBIEO00221 500 aa9.56□□□□□ -0.88
NCL-210ENST00000494618 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
NCL-210ENST00000494618 CHRNA4P43681 627 aa9.56□□□□□ -0.88
NCL-210ENST00000494618 ORC1Q13415 861 aa9.56□□□□□ -0.88
NCL-210ENST00000494618 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
NCL-210ENST00000494618 LINC01387J3KSC0 135 aa9.55□□□□□ -0.88
NCL-210ENST00000494618 TRPA1O75762 1119 aa9.55□□□□□ -0.88
NCL-210ENST00000494618 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
NCL-210ENST00000494618 LENG1Q96BZ8 264 aaPredicted RBP9.55□□□□□ -0.88
NCL-210ENST00000494618 EIF1AYO14602 144 aaKnown RBP9.54□□□□□ -0.88
NCL-210ENST00000494618 IGHA2P01877 340 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 PLCB3Q01970 1234 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 PEAR1Q5VY43 1037 aaPredicted RBP9.54□□□□□ -0.88
NCL-210ENST00000494618 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 CSRNP1Q96S65 589 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 SPOCK3Q9BQ16 436 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 SH2B1Q9NRF2 756 aaPredicted RBP9.54□□□□□ -0.88
NCL-210ENST00000494618 USP21Q9UK80 565 aa9.54□□□□□ -0.88
NCL-210ENST00000494618 DEAF1O75398 565 aaPredicted RBP9.53□□□□□ -0.88
NCL-210ENST00000494618 ITGB2P05107 769 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 SELPP16109 830 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 CDC25BP30305 580 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 GATA4P43694 442 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 SETDB1Q15047 1291 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 BSNDQ8WZ55 320 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 LATS2Q9NRM7 1088 aa9.53□□□□□ -0.88
NCL-210ENST00000494618 EPHA1P21709 976 aa9.52□□□□□ -0.89
NCL-210ENST00000494618 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
NCL-210ENST00000494618 ASAP3Q8TDY4 903 aa9.52□□□□□ -0.89
NCL-210ENST00000494618 HHIPQ96QV1 700 aa9.52□□□□□ -0.89
NCL-210ENST00000494618 BHLHE41Q9C0J9 482 aaPredicted RBP9.52□□□□□ -0.89
NCL-210ENST00000494618 A0A1W2PP55 124 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 H3BRJ5 948 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 DLL1O00548 723 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 FSCN2O14926 492 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 TREHO43280 583 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 ARL4DP49703 201 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 TXNDC11Q6PKC3 985 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 SND1Q7KZF4 910 aaKnown RBP eCLIP9.51□□□□□ -0.893e-17■□□□□ 11
NCL-210ENST00000494618 KLHL23Q8NBE8 558 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 CCDC74AQ96AQ1 378 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 ASB16Q96NS5 453 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 LIN7BQ9HAP6 207 aa9.51□□□□□ -0.89
NCL-210ENST00000494618 KIAA0319Q5VV43 1072 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 ADAMTSL4Q6UY14 1074 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 WNT8BQ93098 351 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
NCL-210ENST00000494618 EHD4Q9H223 541 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 NPHS2Q9NP85 383 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 SOX13Q9UN79 622 aa9.5□□□□□ -0.89
NCL-210ENST00000494618 GADD45BO75293 160 aaPredicted RBP9.49□□□□□ -0.89
NCL-210ENST00000494618 PROCP04070 461 aa9.49□□□□□ -0.89
NCL-210ENST00000494618 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
NCL-210ENST00000494618 ADGRE1Q14246 886 aa9.49□□□□□ -0.89
NCL-210ENST00000494618 DSC3Q14574 896 aa9.49□□□□□ -0.89
NCL-210ENST00000494618 OSGEPQ9NPF4 335 aa9.49□□□□□ -0.89
NCL-210ENST00000494618 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
NCL-210ENST00000494618 MBTPS1Q14703 1052 aa9.48□□□□□ -0.89
NCL-210ENST00000494618 CCNJLQ8IV13 435 aa9.48□□□□□ -0.89
NCL-210ENST00000494618 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
NCL-210ENST00000494618 IKBKEQ14164 716 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 TXNRD3Q86VQ6 643 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 GALNT11Q8NCW6 608 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 CARD10Q9BWT7 1032 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 PPP4R2Q9NY27 417 aa9.47□□□□□ -0.89
NCL-210ENST00000494618 A0A096LPE4 126 aa9.46□□□□□ -0.9
NCL-210ENST00000494618 PNMA6FA0A0J9YX94 578 aa9.46□□□□□ -0.9
NCL-210ENST00000494618 A0A1W2PPZ6 126 aa9.46□□□□□ -0.9
NCL-210ENST00000494618 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
NCL-210ENST00000494618 MAPK8P45983 427 aa9.46□□□□□ -0.9
NCL-210ENST00000494618 SUZ12Q15022 739 aaKnown RBP9.46□□□□□ -0.9
NCL-210ENST00000494618 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms