RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ITSN2Q9NZM3 1697 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 ATAD2BQ9ULI0 1458 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 PTPN23Q9H3S7 1636 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 LOC102724428A0A0B4J2F2 783 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 PSAPP07602 524 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 ELNP15502 786 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 SIK1P57059 783 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 ALYREFQ86V81 257 aaKnown RBP4□□□□□ -1.77
CDC42EP3-205ENST00000494083 NLRP13Q86W25 1043 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 EDEM1Q92611 657 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 MYO5CQ9NQX4 1742 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4□□□□□ -1.77
CDC42EP3-205ENST00000494083 USP21Q9UK80 565 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 CDC42BPAQ5VT25 1732 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 CLIP1P30622 1438 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 AKNAQ7Z591 1439 aa4□□□□□ -1.77
CDC42EP3-205ENST00000494083 ARHGEF12Q9NZN5 1544 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 ALX3O95076 343 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 ABL1P00519 1130 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 FOXD4L6Q3SYB3 417 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 FOXD4L3Q6VB84 417 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 OR13H1Q8NG92 308 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 RASSF4Q9H2L5 321 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 ABI2Q9NYB9 513 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 RSPO4Q2I0M5 234 aaPredicted RBP3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 C8orf34Q49A92 452 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 PIK3R5Q8WYR1 880 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 SEMA6BQ9H3T3 888 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 EFCC1Q9HA90 598 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 BCORL1Q5H9F3 1711 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 CFTRP13569 1480 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 SOX18P35713 384 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 AGGF1Q8N302 714 aaeCLIP3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 C1orf127Q8N9H9 656 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 FRRS1LQ9P0K9 344 aa3.99□□□□□ -1.77
CDC42EP3-205ENST00000494083 NKAPLQ5M9Q1 402 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 WFDC8Q8IUA0 241 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 CARD10Q9BWT7 1032 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 ELP3Q9H9T3 547 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 CCDC87Q9NVE4 849 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 GAPVD1Q14C86 1478 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 SPDYE3A6NKU9 549 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 GHRHP01286 108 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 EPHA1P21709 976 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 SETDB1Q15047 1291 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 IL22RA1Q8N6P7 574 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 GALNT11Q8NCW6 608 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 POLIQ9UNA4 740 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 WISP1O95388 367 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 APBA3O96018 575 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 PDGFAP04085 211 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 ADGRE1Q14246 886 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 CEP135Q66GS9 1140 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 ZNF438Q7Z4V0 828 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 RETREG2Q8NC44 543 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 FOXD3Q9UJU5 478 aaPredicted RBP3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 MYOM1P52179 1685 aa3.98□□□□□ -1.77
CDC42EP3-205ENST00000494083 KIF14Q15058 1648 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 IREB2P48200 963 aaKnown RBP3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 MEGF10Q96KG7 1140 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 CHRDQ9H2X0 955 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 SH2B1Q9NRF2 756 aaPredicted RBP3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 LATS2Q9NRM7 1088 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 ARHGAP35Q9NRY4 1499 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 SOGA1O94964 1423 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 TUBGCP6Q96RT7 1819 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 RAC1P63000 192 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 NCAPG2Q86XI2 1143 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 ABTB2Q8N961 1025 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 LENG1Q96BZ8 264 aaPredicted RBP3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 KCNK4Q9NYG8 393 aa3.97□□□□□ -1.77
CDC42EP3-205ENST00000494083 NESP48681 1621 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 LINC01387J3KSC0 135 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 TM4SF5O14894 197 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 DDX3YO15523 660 aaKnown RBP3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 DYRK3O43781 588 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 FZD6O60353 706 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 NOS3P29474 1203 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 HGSNATQ68CP4 663 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 TXNRD3Q86VQ6 643 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 POP1Q99575 1024 aaKnown RBP3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 C11orf16Q9NQ32 467 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 UGGT2Q9NYU1 1516 aa3.96□□□□□ -1.77
CDC42EP3-205ENST00000494083 TTBK1Q5TCY1 1321 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 DNMT1P26358 1616 aaKnown RBP3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 DLL1O00548 723 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 EREGO14944 169 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 PPP1R15AO75807 674 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 HOXD8P13378 290 aaPredicted RBP3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 CEP120Q8N960 986 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 IQGAP2Q13576 1575 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 AAMPQ13685 434 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 PCSK7Q16549 785 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 NOM1Q5C9Z4 860 aaKnown RBP3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 RAPGEF2Q9Y4G8 1499 aa3.96□□□□□ -1.78
CDC42EP3-205ENST00000494083 KDM5CP41229 1560 aa3.95□□□□□ -1.78
CDC42EP3-205ENST00000494083 DNMBPQ6XZF7 1577 aa3.95□□□□□ -1.78
CDC42EP3-205ENST00000494083 METTL12A8MUP2 240 aa3.95□□□□□ -1.78
CDC42EP3-205ENST00000494083 H3BRB1 525 aa3.95□□□□□ -1.78
CDC42EP3-205ENST00000494083 NFKBIEO00221 500 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms