RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PHKA2P46019 1235 aa8.87□□□□□ -0.99
TRA2B-216ENST00000493864 DDX17Q92841 729 aaKnown RBP8.87□□□□□ -0.99
TRA2B-216ENST00000493864 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
TRA2B-216ENST00000493864 NIFKQ9BYG3 293 aaKnown RBP8.87□□□□□ -0.99
TRA2B-216ENST00000493864 TOPAZ1Q8N9V7 1692 aa8.87□□□□□ -0.99
TRA2B-216ENST00000493864 CGNL1Q0VF96 1302 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 SHPRHQ149N8 1683 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 IGFBP4P22692 258 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
TRA2B-216ENST00000493864 OCLNQ16625 522 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.992e-6■□□□□ 8.3
TRA2B-216ENST00000493864 C4orf17Q53FE4 359 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 ILDR2Q71H61 639 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 BRINP3Q76B58 766 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 KRT28Q7Z3Y7 464 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 NME9Q86XW9 330 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 GGNBP2Q9H3C7 697 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 PARP3Q9Y6F1 533 aa8.86□□□□□ -0.99
TRA2B-216ENST00000493864 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 SNRPBP14678 240 aaKnown RBP8.85□□□□□ -0.99
TRA2B-216ENST00000493864 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 PSMA6P60900 246 aaKnown RBP8.85□□□□□ -0.99
TRA2B-216ENST00000493864 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
TRA2B-216ENST00000493864 MORC1Q86VD1 984 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
TRA2B-216ENST00000493864 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 CHMP3Q9Y3E7 222 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 USP6P35125 1406 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 EDC4Q6P2E9 1401 aaKnown RBP8.85□□□□□ -0.99
TRA2B-216ENST00000493864 SSH2Q76I76 1423 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 ITSN1Q15811 1721 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 NPC1L1Q9UHC9 1359 aa8.85□□□□□ -0.99
TRA2B-216ENST00000493864 AKAP12Q02952 1782 aa8.84□□□□□ -0.99
TRA2B-216ENST00000493864 POTECB2RU33 542 aa8.84□□□□□ -0.99
TRA2B-216ENST00000493864 TNNT2P45379 298 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-216ENST00000493864 RALBP1Q15311 655 aa8.84□□□□□ -0.99
TRA2B-216ENST00000493864 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
TRA2B-216ENST00000493864 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
TRA2B-216ENST00000493864 SERTM1A2A2V5 107 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 FBLN1P23142 703 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 SSFA2P28290 1259 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 NOS2P35228 1153 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 FKBP5Q13451 457 aaPredicted RBP8.83□□□□□ -1
TRA2B-216ENST00000493864 TEAD4Q15561 434 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 CCDC184Q52MB2 194 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 SH3PXD2AQ5TCZ1 1133 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 NUTM2GQ5VZR2 741 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 VTI1AQ96AJ9 217 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 AIDAQ96BJ3 306 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 MKNK1Q9BUB5 465 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 PARD3Q8TEW0 1356 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 LRP6O75581 1613 aa8.83□□□□□ -1
TRA2B-216ENST00000493864 TTC21AQ8NDW8 1320 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 PPP2R1AP30153 589 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 SCNN1AP37088 669 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 ABTB2Q8N961 1025 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
TRA2B-216ENST00000493864 TIMMDC1Q9NPL8 285 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 MON2Q7Z3U7 1717 aa8.82□□□□□ -1
TRA2B-216ENST00000493864 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 EML1O00423 815 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 PHLDB3Q6NSJ2 640 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 COG3Q96JB2 828 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 BRD4O60885 1362 aaPredicted RBP8.81□□□□□ -1
TRA2B-216ENST00000493864 KIF1AQ12756 1690 aa8.81□□□□□ -1
TRA2B-216ENST00000493864 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
TRA2B-216ENST00000493864 CCER2I3L3R5 266 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 PTSQ03393 145 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 WDR44Q5JSH3 913 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 NGLY1Q96IV0 654 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 NSD2O96028 1365 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 JCADQ9P266 1359 aa8.8□□□□□ -1
TRA2B-216ENST00000493864 MARF1Q9Y4F3 1742 aaKnown RBP8.8□□□□□ -1
TRA2B-216ENST00000493864 USP31Q70CQ4 1352 aa8.79□□□□□ -1
TRA2B-216ENST00000493864 BRD1O95696 1058 aa8.79□□□□□ -1
TRA2B-216ENST00000493864 TXLNAP40222 546 aa8.79□□□□□ -1
TRA2B-216ENST00000493864 CAPN12Q6ZSI9 719 aa8.79□□□□□ -1
TRA2B-216ENST00000493864 RGS17Q9UGC6 210 aaPredicted RBP8.79□□□□□ -1
TRA2B-216ENST00000493864 SPATA31A3Q5VYP0 1347 aa8.79□□□□□ -1
TRA2B-216ENST00000493864 NRKQ7Z2Y5 1582 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 PXDNQ92626 1479 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 KIF20BQ96Q89 1820 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 SBNO1A3KN83 1393 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 A0A1B0GTH6 734 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 MTHFSP49914 203 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 NLRP13Q86W25 1043 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 AEBP1Q8IUX7 1158 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 C1orf216Q8TAB5 229 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 GAS2L1Q99501 681 aaPredicted RBP8.78□□□□□ -1
TRA2B-216ENST00000493864 MRS2Q9HD23 443 aa8.78□□□□□ -1
TRA2B-216ENST00000493864 ABCA3Q99758 1704 aa8.77□□□□□ -1
TRA2B-216ENST00000493864 SENP3-EIF4A1A0A087X0R7 540 aa8.77□□□□□ -1.01
TRA2B-216ENST00000493864 HIRAP54198 1017 aaPredicted RBP8.77□□□□□ -1.01
TRA2B-216ENST00000493864 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms