RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 Q6ZS46 218 aa9.03□□□□□ -0.96
SMC4-223ENST00000493695 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
SMC4-223ENST00000493695 CCDC97Q96F63 343 aaPredicted RBP9.03□□□□□ -0.96
SMC4-223ENST00000493695 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
SMC4-223ENST00000493695 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
SMC4-223ENST00000493695 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
SMC4-223ENST00000493695 UBASH3BQ8TF42 649 aa9.02□□□□□ -0.97
SMC4-223ENST00000493695 COBLO75128 1261 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 CES1P23141 567 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 NLRP12P59046 1061 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 PDE12Q6L8Q7 609 aaKnown RBP9.01□□□□□ -0.97
SMC4-223ENST00000493695 ADAMTSL4Q6UY14 1074 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 EDEM1Q92611 657 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 CLP1Q92989 425 aaKnown RBP9.01□□□□□ -0.97
SMC4-223ENST00000493695 KLHDC7BQ96G42 594 aa9.01□□□□□ -0.97
SMC4-223ENST00000493695 POP1Q99575 1024 aaKnown RBP9.01□□□□□ -0.97
SMC4-223ENST00000493695 HMX2A2RU54 273 aa9□□□□□ -0.97
SMC4-223ENST00000493695 KIF4AO95239 1232 aa9□□□□□ -0.97
SMC4-223ENST00000493695 NFIAQ12857 509 aa9□□□□□ -0.97
SMC4-223ENST00000493695 AAMPQ13685 434 aa9□□□□□ -0.97
SMC4-223ENST00000493695 KIAA1211Q6ZU35 1233 aa9□□□□□ -0.97
SMC4-223ENST00000493695 ARMC10Q8N2F6 343 aa9□□□□□ -0.97
SMC4-223ENST00000493695 CEP120Q8N960 986 aa9□□□□□ -0.97
SMC4-223ENST00000493695 CNTN3Q9P232 1028 aa9□□□□□ -0.97
SMC4-223ENST00000493695 GRIK1P39086 918 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 CD97P48960 835 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 IRAK1P51617 712 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 UVSSAQ2YD98 709 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 MCTP1Q6DN14 999 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 FOXD4L4Q8WXT5 416 aaPredicted RBP8.99□□□□□ -0.97
SMC4-223ENST00000493695 PBXIP1Q96AQ6 731 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
SMC4-223ENST00000493695 H3BRJ5 948 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 TRPA1O75762 1119 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
SMC4-223ENST00000493695 ACPPP15309 386 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 ARL4DP49703 201 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
SMC4-223ENST00000493695 FDX2Q6P4F2 183 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
SMC4-223ENST00000493695 A6NHS1 94 aa8.97□□□□□ -0.97
SMC4-223ENST00000493695 GAS2O43903 313 aaKnown RBP8.97□□□□□ -0.97
SMC4-223ENST00000493695 ADAM11O75078 769 aa8.97□□□□□ -0.97
SMC4-223ENST00000493695 BMP3P12645 472 aa8.97□□□□□ -0.97
SMC4-223ENST00000493695 MYRFLQ96LU7 910 aa8.97□□□□□ -0.97
SMC4-223ENST00000493695 PDE2AO00408 941 aaPredicted RBP8.96□□□□□ -0.98
SMC4-223ENST00000493695 MED26O95402 600 aa8.96□□□□□ -0.98
SMC4-223ENST00000493695 PIP4K2BP78356 416 aa8.96□□□□□ -0.98
SMC4-223ENST00000493695 NOM1Q5C9Z4 860 aaKnown RBP8.96□□□□□ -0.98
SMC4-223ENST00000493695 FAM46AQ96IP4 442 aaKnown RBP8.96□□□□□ -0.98
SMC4-223ENST00000493695 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
SMC4-223ENST00000493695 RUSC1Q9BVN2 902 aa8.96□□□□□ -0.98
SMC4-223ENST00000493695 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
SMC4-223ENST00000493695 PAX4O43316 350 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 RXRBP28702 533 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 RNF43Q68DV7 783 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 BEND4Q6ZU67 534 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 ADAM19Q9H013 955 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 RNF208Q9H0X6 261 aa8.95□□□□□ -0.98
SMC4-223ENST00000493695 GP2P55259 537 aaKnown RBP8.94□□□□□ -0.98
SMC4-223ENST00000493695 ANKRD34AQ69YU3 496 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 ZDHHC13Q8IUH4 622 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 FAM20CQ8IXL6 584 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 SALL4Q9UJQ4 1053 aa8.94□□□□□ -0.98
SMC4-223ENST00000493695 PREPP48147 710 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 KRTAP1-3Q8IUG1 177 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 CLEC10AQ8IUN9 316 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 HELQQ8TDG4 1101 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 HHIPQ96QV1 700 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 USP26Q9BXU7 913 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 GGNBP2Q9H3C7 697 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 OSGEPQ9NPF4 335 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 DZANK1Q9NVP4 752 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
SMC4-223ENST00000493695 PDGFAP04085 211 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 MPSTP25325 297 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 C19orf57Q0VDD7 668 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
SMC4-223ENST00000493695 SHKBP1Q8TBC3 707 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 WNT8BQ93098 351 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 OSMRQ99650 979 aa8.92□□□□□ -0.98
SMC4-223ENST00000493695 OAS3Q9Y6K5 1087 aaKnown RBP8.92□□□□□ -0.98
SMC4-223ENST00000493695 WDR64B1ANS9 1081 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 EIF1AXP47813 144 aaKnown RBP8.91□□□□□ -0.98
SMC4-223ENST00000493695 MTMR3Q13615 1198 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 NUTM2GQ5VZR2 741 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 FBXL6Q8N531 539 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
SMC4-223ENST00000493695 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
SMC4-223ENST00000493695 MFSD14AQ96MC6 490 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 FAM83CQ9BQN1 747 aa8.91□□□□□ -0.98
SMC4-223ENST00000493695 ARID3CA6NKF2 412 aa8.9□□□□□ -0.98
SMC4-223ENST00000493695 TM4SF5O14894 197 aa8.9□□□□□ -0.98
SMC4-223ENST00000493695 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms