RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PPP4R3BQ5MIZ7 849 aa15.53■□□□□ 0.08
TRIM11-204ENST00000493030 POLKQ9UBT6 870 aa15.53■□□□□ 0.08
TRIM11-204ENST00000493030 DACT1Q9NYF0 836 aa15.53■□□□□ 0.08
TRIM11-204ENST00000493030 RTCBQ9Y3I0 505 aaKnown RBP15.53■□□□□ 0.08
TRIM11-204ENST00000493030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRIM11-204ENST00000493030 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.08
TRIM11-204ENST00000493030 IFI16Q16666 785 aaKnown RBP15.52■□□□□ 0.08
TRIM11-204ENST00000493030 USP37Q86T82 979 aa15.52■□□□□ 0.08
TRIM11-204ENST00000493030 PTGS1P23219 599 aa15.52■□□□□ 0.08
TRIM11-204ENST00000493030 UVSSAQ2YD98 709 aa15.52■□□□□ 0.08
TRIM11-204ENST00000493030 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
TRIM11-204ENST00000493030 TNNI2P48788 182 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 EHBP1Q8NDI1 1231 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 ZNF830Q96NB3 372 aaPredicted RBP15.52■□□□□ 0.07
TRIM11-204ENST00000493030 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 PSMA7O14818 248 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 CTAGE1Q96RT6 745 aa15.52■□□□□ 0.07
TRIM11-204ENST00000493030 TFCP2Q12800 502 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
TRIM11-204ENST00000493030 SPDYE3A6NKU9 549 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
TRIM11-204ENST00000493030 LRSAM1Q6UWE0 723 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 TSPYL6Q8N831 410 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 WDR62O43379 1518 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 TRIM75PA6NK02 468 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 ARID5AQ03989 594 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 ZNF354CQ86Y25 554 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 AOPEPQ8N6M6 819 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 IKBKGQ9Y6K9 419 aa15.51■□□□□ 0.07
TRIM11-204ENST00000493030 CYLC1P35663 651 aaPredicted RBP15.51■□□□□ 0.07
TRIM11-204ENST00000493030 RRP36Q96EU6 259 aaKnown RBP15.51■□□□□ 0.07
TRIM11-204ENST00000493030 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 APOBRQ0VD83 1088 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 FAM107BQ9H098 131 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 DNAJC25Q9H1X3 360 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 RXRAP19793 462 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 F13A1P00488 732 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 PARP3Q9Y6F1 533 aa15.5■□□□□ 0.07
TRIM11-204ENST00000493030 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 RIMS2Q9UQ26 1411 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 GNAT2P19087 354 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 DPH6Q7L8W6 267 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 ZBTB21Q9ULJ3 1066 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 SPTLC2O15270 562 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 SKILP12757 684 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 GJC1P36383 396 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 SPAG1Q07617 926 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 PLVAPQ9BX97 442 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 FLT4P35916 1363 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 TSNARE1Q96NA8 513 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 PABPN1LA6NDY0 278 aaKnown RBP15.49■□□□□ 0.07
TRIM11-204ENST00000493030 MICALCLQ6ZW33 695 aa15.49■□□□□ 0.07
TRIM11-204ENST00000493030 MCM7P33993 719 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.076e-8■■■□□ 16.2
TRIM11-204ENST00000493030 PPP1R14CQ8TAE6 165 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 RTL9Q8NET4 1388 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
TRIM11-204ENST00000493030 AKNAD1Q5T1N1 836 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 CEP85Q6P2H3 762 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 CEP112Q8N8E3 955 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 TRERF1Q96PN7 1200 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 IMPG2Q9BZV3 1241 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 TTC41PQ6P2S7 1318 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 CALML3P27482 149 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 KRT2P35908 639 aa15.48■□□□□ 0.07
TRIM11-204ENST00000493030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.48■□□□□ 0.074e-8■■■□□ 18.6
TRIM11-204ENST00000493030 PLCG2P16885 1265 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 LMOD1P29536 600 aaPredicted RBP15.47■□□□□ 0.07
TRIM11-204ENST00000493030 FAM200AQ8TCP9 573 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 WDR7Q9Y4E6 1490 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 GCP02774 474 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 AK2P54819 239 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 SP4Q02446 784 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 CREB3L3Q68CJ9 461 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 GIMAP7Q8NHV1 300 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 EYA1Q99502 592 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 PLIN2Q99541 437 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 BICC1Q9H694 974 aaKnown RBP15.47■□□□□ 0.07
TRIM11-204ENST00000493030 DNAI1Q9UI46 699 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 PLCH2O75038 1416 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 DCAF5Q96JK2 942 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 BBXQ8WY36 941 aaPredicted RBP15.47■□□□□ 0.07
TRIM11-204ENST00000493030 MAP3K5Q99683 1374 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 GPATCH8Q9UKJ3 1502 aaKnown RBP15.47■□□□□ 0.07
TRIM11-204ENST00000493030 FAM13AO94988 1023 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 STX17P56962 302 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
TRIM11-204ENST00000493030 VAMP4O75379 141 aa15.46■□□□□ 0.07
TRIM11-204ENST00000493030 A0A1W2PRG0 241 aa15.46■□□□□ 0.07
TRIM11-204ENST00000493030 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.07
TRIM11-204ENST00000493030 HSF2BPO75031 334 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms