RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 PLA2G4DQ86XP0 818 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 RCOR1Q9UKL0 485 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 DNAJC25Q9H1X3 360 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
SEMA4D-220ENST00000492386 ERVV-2B6SEH9 535 aa18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 ZNF165P49910 485 aa18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 ZNF75DP51815 510 aa18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 CCT2P78371 535 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 CEBPZQ03701 1054 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 MTERF4Q7Z6M4 381 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 PUS3Q9BZE2 481 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 FTOQ9C0B1 505 aaKnown RBP eCLIP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 NCOA5Q9HCD5 579 aaKnown RBP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 M0R2C6 588 aa18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 FOSBP53539 338 aa18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
SEMA4D-220ENST00000492386 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.62
SEMA4D-220ENST00000492386 PDIA3P30101 505 aaKnown RBP18.95■□□□□ 0.62
SEMA4D-220ENST00000492386 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
SEMA4D-220ENST00000492386 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
SEMA4D-220ENST00000492386 KIF3AQ9Y496 699 aa18.95■□□□□ 0.62
SEMA4D-220ENST00000492386 WDR17Q8IZU2 1322 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 CAVIN2O95810 425 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 TTLL5Q6EMB2 1281 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 CCDC186Q7Z3E2 898 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 USP28Q96RU2 1077 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 TRIM5Q9C035 493 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 GOLPH3LQ9H4A5 285 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 SHANK3Q9BYB0 1731 aa18.94■□□□□ 0.62
SEMA4D-220ENST00000492386 CHST3Q7LGC8 479 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 OSBP2Q969R2 916 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 ATL3Q6DD88 541 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 FBXL16Q8N461 479 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 TSC1Q92574 1164 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 NRBP1Q9UHY1 535 aa18.93■□□□□ 0.62
SEMA4D-220ENST00000492386 FOXP2O15409 715 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 SNW1Q13573 536 aaKnown RBP18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 IQCB1Q15051 598 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 VSIG10Q8N0Z9 540 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 EVCP57679 992 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 CEP126Q9P2H0 1117 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 CARMIL3Q8ND23 1372 aa18.92■□□□□ 0.62
SEMA4D-220ENST00000492386 CTAGE5O15320 804 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 PPFIA3O75145 1194 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 ZNF710Q8N1W2 664 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 ZNF396Q96N95 335 aaPredicted RBP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 FDPSP14324 419 aaKnown RBP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 ADORA1P30542 326 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 LRMPQ12912 555 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 C11orf57Q6ZUT1 292 aaPredicted RBP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 DRC7Q8IY82 874 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 ENGASEQ8NFI3 743 aa18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 DDX60Q8IY21 1712 aaKnown RBP18.91■□□□□ 0.62
SEMA4D-220ENST00000492386 ZSCAN25Q6NSZ9 544 aa18.9■□□□□ 0.62
SEMA4D-220ENST00000492386 GUCY1B3Q02153 619 aa18.9■□□□□ 0.62
SEMA4D-220ENST00000492386 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
SEMA4D-220ENST00000492386 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
SEMA4D-220ENST00000492386 MYH7P12883 1935 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 STX1AQ16623 288 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 XAGE2Q96GT9 111 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 CDC25BP30305 580 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 FAM160A1Q05DH4 1040 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 TCIRG1Q13488 830 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC57Q2TAC2 916 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 SARM1Q6SZW1 724 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC73Q6ZRK6 1079 aa18.89■□□□□ 0.61
SEMA4D-220ENST00000492386 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 CLIP2Q9UDT6 1046 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 CTNNA3Q9UI47 895 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 SCARF1Q14162 830 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 AKAP2Q9Y2D5 859 aa18.88■□□□□ 0.61
SEMA4D-220ENST00000492386 HAND2P61296 217 aa18.87■□□□□ 0.61
SEMA4D-220ENST00000492386 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC144BQ3MJ40 725 aa18.87■□□□□ 0.61
SEMA4D-220ENST00000492386 CCDC144CPQ8IYA2 1237 aa18.87■□□□□ 0.61
SEMA4D-220ENST00000492386 XIRP1Q702N8 1843 aaKnown RBP18.87■□□□□ 0.61
SEMA4D-220ENST00000492386 RIOK3O14730 519 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 KINO60870 393 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 FGAP02671 866 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 IL2RBP14784 551 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 ME1P48163 572 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 TRIM28Q13263 835 aaKnown RBP18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 GORABQ5T7V8 394 aa18.86■□□□□ 0.61
SEMA4D-220ENST00000492386 FSIP1Q8NA03 581 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms