RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 ANGEL2Q5VTE6 544 aaKnown RBP13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
PCYT1A-216ENST00000491544 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 PSMD14O00487 310 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 TCIRG1Q13488 830 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 TTLL12Q14166 644 aaPredicted RBP13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 MTFR1Q15390 333 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 ALYREFQ86V81 257 aaKnown RBP13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 NKX2-3Q8TAU0 364 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
PCYT1A-216ENST00000491544 CACNA1FO60840 1977 aa13.27□□□□□ -0.28
PCYT1A-216ENST00000491544 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.29
PCYT1A-216ENST00000491544 FARP2O94887 1054 aaPredicted RBP13.27□□□□□ -0.29
PCYT1A-216ENST00000491544 GJA8P48165 433 aa13.27□□□□□ -0.29
PCYT1A-216ENST00000491544 PIP4K2AP48426 406 aaPredicted RBP13.27□□□□□ -0.29
PCYT1A-216ENST00000491544 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 INHBEP58166 350 aa13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 PTPN12Q05209 780 aaKnown RBP13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 CRAMP1Q96RY5 1269 aa13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
PCYT1A-216ENST00000491544 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 VAMP4O75379 141 aa13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 A1BGP04217 495 aa13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 GTF2E1P29083 439 aaPredicted RBP13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 DPP8Q6V1X1 898 aaPredicted RBP13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 SCAF8Q9UPN6 1271 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 HCN4Q9Y3Q4 1203 aa13.25□□□□□ -0.29
PCYT1A-216ENST00000491544 ANXA1P04083 346 aa13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 HOXB7P09629 217 aa13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 SCARF1Q14162 830 aa13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 CDX2Q99626 313 aaPredicted RBP13.24□□□□□ -0.29
PCYT1A-216ENST00000491544 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 MYL6BP14649 208 aa13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 TMX4Q9H1E5 349 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 CHPF2Q9P2E5 772 aa13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
PCYT1A-216ENST00000491544 GJB1P08034 283 aa13.22□□□□□ -0.29
PCYT1A-216ENST00000491544 MAGEA10P43363 369 aaPredicted RBP13.22□□□□□ -0.29
PCYT1A-216ENST00000491544 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
PCYT1A-216ENST00000491544 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
PCYT1A-216ENST00000491544 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
PCYT1A-216ENST00000491544 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
PCYT1A-216ENST00000491544 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 MUC6Q6W4X9 2439 aa13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 ZNF697Q5TEC3 545 aa13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 UBE2OQ9C0C9 1292 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 COL2A1P02458 1487 aaPredicted RBP13.2□□□□□ -0.3
PCYT1A-216ENST00000491544 BCAR3O75815 825 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 AIMP1Q12904 312 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 PDIA6Q15084 440 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 PHAXQ9H814 394 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-216ENST00000491544 NUP98P52948 1817 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 LAMB1P07942 1786 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 RGL2O15211 777 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 CCL5P13501 91 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 G2E3Q7L622 706 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 U2AF1L4Q8WU68 220 aaKnown RBP13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 ARHGAP39Q9C0H5 1083 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 KCNQ5Q9NR82 932 aa13.18□□□□□ -0.3
PCYT1A-216ENST00000491544 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 NF2P35240 595 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 PRKG1Q13976 671 aa13.17□□□□□ -0.3
PCYT1A-216ENST00000491544 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms