RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 TLL2Q9Y6L7 1015 aa11.99□□□□□ -0.49
SRRM1-217ENST00000490543 GPTP24298 496 aa11.98□□□□□ -0.49
SRRM1-217ENST00000490543 HIC1Q14526 733 aa11.98□□□□□ -0.49
SRRM1-217ENST00000490543 TTLL7Q6ZT98 887 aa11.98□□□□□ -0.49
SRRM1-217ENST00000490543 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-217ENST00000490543 RPGRQ92834 1020 aaKnown RBP11.98□□□□□ -0.49
SRRM1-217ENST00000490543 THSD7BQ9C0I4 1608 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 NPC1L1Q9UHC9 1359 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 UBN2Q6ZU65 1347 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 GPR37O15354 613 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-217ENST00000490543 MAP2K2P36507 400 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.491e-12■■□□□ 14.4
SRRM1-217ENST00000490543 TAF7Q15545 349 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-217ENST00000490543 SUSD4Q5VX71 490 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 SLF2Q8IX21 1173 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 NYXQ9GZU5 481 aa11.97□□□□□ -0.49
SRRM1-217ENST00000490543 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
SRRM1-217ENST00000490543 CASP8AP2Q9UKL3 1982 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 MAP3K15Q6ZN16 1313 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
SRRM1-217ENST00000490543 DNAJB2P25686 324 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 KCNC4Q03721 635 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 CXCL9Q07325 125 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 AOC3Q16853 763 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 SAPCD2Q86UD0 394 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-217ENST00000490543 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
SRRM1-217ENST00000490543 TRPM7Q96QT4 1865 aa11.95□□□□□ -0.5
SRRM1-217ENST00000490543 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-217ENST00000490543 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
SRRM1-217ENST00000490543 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
SRRM1-217ENST00000490543 ZIC5Q96T25 663 aa11.95□□□□□ -0.5
SRRM1-217ENST00000490543 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
SRRM1-217ENST00000490543 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
SRRM1-217ENST00000490543 NUP98P52948 1817 aa11.95□□□□□ -0.5
SRRM1-217ENST00000490543 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
SRRM1-217ENST00000490543 NTSR2O95665 410 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 MYL6BP14649 208 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 GMPSP49915 693 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-217ENST00000490543 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-217ENST00000490543 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 DLK2Q6UY11 383 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
SRRM1-217ENST00000490543 SHTN1A0MZ66 631 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 FECHP22830 423 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 CIAPIN1Q6FI81 312 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 KIF6Q6ZMV9 814 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 CCER1Q8TC90 406 aaPredicted RBP11.93□□□□□ -0.5
SRRM1-217ENST00000490543 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 ZNF408Q9H9D4 720 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 PGAP2Q9UHJ9 254 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
SRRM1-217ENST00000490543 PPP2R1AP30153 589 aa11.92□□□□□ -0.5
SRRM1-217ENST00000490543 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
SRRM1-217ENST00000490543 EIF4A1P60842 406 aaKnown RBP11.92□□□□□ -0.5
SRRM1-217ENST00000490543 DGKZQ13574 1117 aa11.92□□□□□ -0.5
SRRM1-217ENST00000490543 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
SRRM1-217ENST00000490543 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
SRRM1-217ENST00000490543 CA12O43570 354 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 RAD17O75943 681 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-217ENST00000490543 TJAP1Q5JTD0 557 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
SRRM1-217ENST00000490543 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 HHIPL1Q96JK4 782 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
SRRM1-217ENST00000490543 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
SRRM1-217ENST00000490543 RTFDC1Q9BY42 306 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-217ENST00000490543 ABCC4O15439 1325 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 OATP04181 439 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 SLC10A5Q5PT55 438 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 USP48Q86UV5 1035 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 MTRQ99707 1265 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
SRRM1-217ENST00000490543 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
SRRM1-217ENST00000490543 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
SRRM1-217ENST00000490543 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 SP8Q8IXZ3 490 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
SRRM1-217ENST00000490543 BCL2L13Q9BXK5 485 aa11.89□□□□□ -0.51
SRRM1-217ENST00000490543 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
SRRM1-217ENST00000490543 BBOX1O75936 387 aa11.88□□□□□ -0.51
SRRM1-217ENST00000490543 ANXA1P04083 346 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms