RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 COL26A1Q96A83 441 aa11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 IVNS1ABPQ9Y6Y0 642 aa11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
TRAPPC12-221ENST00000489032 ABL1P00519 1130 aa11.34□□□□□ -0.59
TRAPPC12-221ENST00000489032 WDR44Q5JSH3 913 aa11.34□□□□□ -0.59
TRAPPC12-221ENST00000489032 NBPF10Q6P3W6 841 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-221ENST00000489032 PPP1R1BQ9UD71 204 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-221ENST00000489032 HCN4Q9Y3Q4 1203 aa11.34□□□□□ -0.59
TRAPPC12-221ENST00000489032 NWD2Q9ULI1 1742 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 RHOQP17081 205 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 TATP17735 454 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 NAA30Q147X3 362 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 TIMMDC1Q9NPL8 285 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 STK26Q9P289 416 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 DISP2A7MBM2 1401 aa11.33□□□□□ -0.6
TRAPPC12-221ENST00000489032 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
TRAPPC12-221ENST00000489032 EZH2Q15910 746 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-221ENST00000489032 TMEM132EQ6IEE7 984 aa11.32□□□□□ -0.6
TRAPPC12-221ENST00000489032 GNEQ9Y223 722 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-221ENST00000489032 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
TRAPPC12-221ENST00000489032 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
TRAPPC12-221ENST00000489032 PLCH1Q4KWH8 1693 aa11.31□□□□□ -0.6
TRAPPC12-221ENST00000489032 EML1O00423 815 aa11.31□□□□□ -0.6
TRAPPC12-221ENST00000489032 SCNN1AP37088 669 aa11.31□□□□□ -0.6
TRAPPC12-221ENST00000489032 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
TRAPPC12-221ENST00000489032 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 YTHDC2Q9H6S0 1430 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 C16orf46Q6P387 395 aa11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 ALDH16A1Q8IZ83 802 aa11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 NEUROD4Q9HD90 331 aa11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
TRAPPC12-221ENST00000489032 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 GTF3C2Q8WUA4 911 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 SPON1Q9HCB6 807 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
TRAPPC12-221ENST00000489032 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 SERPINB4P48594 390 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 CAMKK2Q96RR4 588 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 POGKQ9P215 609 aa11.28□□□□□ -0.6
TRAPPC12-221ENST00000489032 TECPR2O15040 1411 aa11.27□□□□□ -0.6
TRAPPC12-221ENST00000489032 HIF1AQ16665 826 aa11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 NBPF8Q3BBV2 869 aa11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 ARSJQ5FYB0 599 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 ZNF295-AS1Q8N0V1 137 aa11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 GMPR2Q9P2T1 348 aaKnown RBP11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
TRAPPC12-221ENST00000489032 KCNQ2O43526 872 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 TXLNAP40222 546 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 RTN1Q16799 776 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 PGBD3Q8N328 593 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 TRIM47Q96LD4 638 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 EGFL7Q9UHF1 273 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 CAMTA1Q9Y6Y1 1673 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 KNDC1Q76NI1 1749 aa11.26□□□□□ -0.61
TRAPPC12-221ENST00000489032 ADGRB1O14514 1584 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 SOBPA7XYQ1 873 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 TRIM37O94972 964 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 APBA3O96018 575 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 WAPLQ7Z5K2 1190 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 DYRK1BQ9Y463 629 aa11.25□□□□□ -0.61
TRAPPC12-221ENST00000489032 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 HELQQ8TDG4 1101 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 MYO19Q96H55 970 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 DLC1Q96QB1 1528 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
TRAPPC12-221ENST00000489032 FAM83GA6ND36 823 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 H3BRB1 525 aa11.23□□□□□ -0.61
TRAPPC12-221ENST00000489032 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms