RNA–Protein interactions for RNA: ENST00000488930.5

NCK1-210, Transcript of NCK adaptor protein 1, humanhuman

TSL 5

Gene NCK1, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-210ENST00000488930 DOC2BQ14184 412 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.66□□□□□ -1.82
NCK1-210ENST00000488930 NCAPG2Q86XI2 1143 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 CCER1Q8TC90 406 aaPredicted RBP3.66□□□□□ -1.82
NCK1-210ENST00000488930 WFDC12Q8WWY7 111 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 NSUN5Q96P11 429 aaKnown RBP3.66□□□□□ -1.82
NCK1-210ENST00000488930 FAM129BQ96TA1 746 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 CEP41Q9BYV8 373 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 DNAJC25Q9H1X3 360 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 CHRDQ9H2X0 955 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 AKTIPQ9H8T0 292 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 DZANK1Q9NVP4 752 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 TMEM63CQ9P1W3 806 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 USP20Q9Y2K6 914 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 HIF3AQ9Y2N7 669 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 SYNGAP1Q96PV0 1343 aa3.66□□□□□ -1.82
NCK1-210ENST00000488930 MEGF11A6BM72 1044 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 FAM229AH3BQW9 127 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 J3QW42 95 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 NDUFB5O43674 189 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 BRD1O95696 1058 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 CD68P34810 354 aaPredicted RBP3.65□□□□□ -1.83
NCK1-210ENST00000488930 MLLT1Q03111 559 aaPredicted RBP3.65□□□□□ -1.83
NCK1-210ENST00000488930 DNM1Q05193 864 aaKnown RBP3.65□□□□□ -1.83
NCK1-210ENST00000488930 ECM1Q16610 540 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 COL13A1Q5TAT6 717 aaPredicted RBP3.65□□□□□ -1.83
NCK1-210ENST00000488930 BSNDQ8WZ55 320 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 DMRTB1Q96MA1 342 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 GGNBP2Q9H3C7 697 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 ZFYVE1Q9HBF4 777 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 SEC31BQ9NQW1 1179 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 USP21Q9UK80 565 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 SOX13Q9UN79 622 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 AMOTL2Q9Y2J4 779 aa3.65□□□□□ -1.83
NCK1-210ENST00000488930 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 SCO2A0A1W2PP80 73 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 PDE2AO00408 941 aaPredicted RBP3.64□□□□□ -1.83
NCK1-210ENST00000488930 FSCN2O14926 492 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 PHACTR2O75167 634 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ITGB7P26010 798 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 NOS3P29474 1203 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ARL4DP49703 201 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ARHGAP4P98171 946 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 CPSF6Q16630 551 aaKnown RBP eCLIP3.64□□□□□ -1.83
NCK1-210ENST00000488930 HP1BP3Q5SSJ5 553 aaPredicted RBP3.64□□□□□ -1.83
NCK1-210ENST00000488930 CEP135Q66GS9 1140 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ANKRD34AQ69YU3 496 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 HFE2Q6ZVN8 426 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ATCAYQ86WG3 371 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 C1orf127Q8N9H9 656 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 POP1Q99575 1024 aaKnown RBP3.64□□□□□ -1.83
NCK1-210ENST00000488930 RBCK1Q9BYM8 510 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 RASSF4Q9H2L5 321 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 SUGCTQ9HAC7 445 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 CNTN3Q9P232 1028 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 POLIQ9UNA4 740 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 TRIM33Q9UPN9 1127 aa3.64□□□□□ -1.83
NCK1-210ENST00000488930 ATP11AP98196 1134 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 RPS26P11Q5JNZ5 115 aaPredicted RBP3.63□□□□□ -1.83
NCK1-210ENST00000488930 KIAA0319Q5VV43 1072 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 GDF6Q6KF10 455 aaPredicted RBP3.63□□□□□ -1.83
NCK1-210ENST00000488930 SHISA2Q6UWI4 295 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 PRR23CQ6ZRP0 262 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 KRTAP1-3Q8IUG1 177 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 GLYCTKQ8IVS8 523 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 GALNT12Q8IXK2 581 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 NXPE3Q969Y0 559 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 ZFYVE28Q9HCC9 887 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 BRPF3Q9ULD4 1205 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 RNF112Q9ULX5 631 aa3.63□□□□□ -1.83
NCK1-210ENST00000488930 IGHA2P01877 340 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 CYP2E1P05181 493 aaPredicted RBP3.62□□□□□ -1.83
NCK1-210ENST00000488930 EPHA1P21709 976 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 IREB2P48200 963 aaKnown RBP3.62□□□□□ -1.83
NCK1-210ENST00000488930 C19orf57Q0VDD7 668 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 C8orf34Q49A92 452 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 PRSS36Q5K4E3 855 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 PRPF40BQ6NWY9 871 aaKnown RBP3.62□□□□□ -1.83
NCK1-210ENST00000488930 NBPF11Q86T75 865 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 CCNJLQ8IV13 435 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 TP53INP1Q96A56 240 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 FAM46AQ96IP4 442 aaKnown RBP3.62□□□□□ -1.83
NCK1-210ENST00000488930 RNF208Q9H0X6 261 aa3.62□□□□□ -1.83
NCK1-210ENST00000488930 H3BRB1 525 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 DHX15O43143 795 aaKnown RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 CPNE3O75131 537 aaKnown RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 ITPKAP23677 461 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 HNRNPUQ00839 825 aaKnown RBP eCLIP3.61□□□□□ -1.83
NCK1-210ENST00000488930 AAMPQ13685 434 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 LRP8Q14114 963 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 FOXD4L6Q3SYB3 417 aaPredicted RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 ARTNQ5T4W7 220 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 PEAR1Q5VY43 1037 aaPredicted RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 FOXD4L3Q6VB84 417 aaPredicted RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.61□□□□□ -1.83
NCK1-210ENST00000488930 VN1R5Q7Z5H4 357 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 RETREG2Q8NC44 543 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 GALNT11Q8NCW6 608 aa3.61□□□□□ -1.83
NCK1-210ENST00000488930 DDX54Q8TDD1 881 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms