RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SGSM2O43147 1006 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 SRGNP10124 158 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 NBR1Q14596 966 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 MYH13Q9UKX3 1938 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 PDE6BP35913 854 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 ZAP70P43403 619 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
COL21A1-211ENST00000488912 BCAMP50895 628 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 UPF1Q92900 1129 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL21A1-211ENST00000488912 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 USP26Q9BXU7 913 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 HIP1O00291 1037 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 CHGBP05060 677 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
COL21A1-211ENST00000488912 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
COL21A1-211ENST00000488912 A0A0D9SFI3 127 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 UQCRFS1P1P0C7P4 283 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 KLRK1P26718 216 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 KCNJ4P48050 445 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 ANKIB1Q9P2G1 1089 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 LTBP1Q14766 1721 aa13.21□□□□□ -0.29
COL21A1-211ENST00000488912 DOCK2Q92608 1830 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 BBOX1O75936 387 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 NPR1P16066 1061 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 GYG1P46976 350 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 RASGRF1Q13972 1273 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.3
COL21A1-211ENST00000488912 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
COL21A1-211ENST00000488912 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
COL21A1-211ENST00000488912 XDHP47989 1333 aa13.2□□□□□ -0.3
COL21A1-211ENST00000488912 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-211ENST00000488912 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-211ENST00000488912 GPSM2P81274 684 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 SLFNL1Q499Z3 407 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-211ENST00000488912 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-211ENST00000488912 COL1A1P02452 1464 aaPredicted RBP13.19□□□□□ -0.3
COL21A1-211ENST00000488912 RAD50Q92878 1312 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 IRS2Q9Y4H2 1338 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
COL21A1-211ENST00000488912 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 CAVIN4Q5BKX8 364 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 IPO9Q96P70 1041 aaKnown RBP13.18□□□□□ -0.3
COL21A1-211ENST00000488912 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 KIF2CQ99661 725 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
COL21A1-211ENST00000488912 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
COL21A1-211ENST00000488912 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
COL21A1-211ENST00000488912 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
COL21A1-211ENST00000488912 GOLGB1Q14789 3259 aaKnown RBP13.18□□□□□ -0.3
COL21A1-211ENST00000488912 ZBTB7AO95365 584 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 CHRNA5P30532 468 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 ALDH1B1P30837 517 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 TMC4Q7Z404 712 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 ZNF589Q86UQ0 364 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 KIF13BQ9NQT8 1826 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 H0YIN7 160 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 TTF1Q15361 905 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 SP8Q8IXZ3 490 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 GNL3LQ9NVN8 582 aaKnown RBP13.17□□□□□ -0.3
COL21A1-211ENST00000488912 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
COL21A1-211ENST00000488912 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
COL21A1-211ENST00000488912 UFL1O94874 794 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
COL21A1-211ENST00000488912 PTH1RQ03431 593 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 STYK1Q6J9G0 422 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
COL21A1-211ENST00000488912 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
COL21A1-211ENST00000488912 IDH1O75874 414 aaKnown RBP13.15□□□□□ -0.3
COL21A1-211ENST00000488912 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
COL21A1-211ENST00000488912 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
COL21A1-211ENST00000488912 MAST3O60307 1309 aa13.14□□□□□ -0.31
COL21A1-211ENST00000488912 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
COL21A1-211ENST00000488912 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
COL21A1-211ENST00000488912 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms