RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
HLA-DPB1-216ENST00000488575 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
HLA-DPB1-216ENST00000488575 PODNQ7Z5L7 613 aa16.57■□□□□ 0.24
HLA-DPB1-216ENST00000488575 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
HLA-DPB1-216ENST00000488575 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
HLA-DPB1-216ENST00000488575 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
HLA-DPB1-216ENST00000488575 OGFOD1Q8N543 542 aa16.56■□□□□ 0.24
HLA-DPB1-216ENST00000488575 COL25A1Q9BXS0 654 aaPredicted RBP16.56■□□□□ 0.24
HLA-DPB1-216ENST00000488575 GGA1Q9UJY5 639 aa16.56■□□□□ 0.24
HLA-DPB1-216ENST00000488575 MYO3BQ8WXR4 1341 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 ECM29Q5VYK3 1845 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 UBE2Q1Q7Z7E8 422 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
HLA-DPB1-216ENST00000488575 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 PROSER3Q2NL68 480 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 LRCH3Q96II8 777 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 PTPN18Q99952 460 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 SSC5DA1L4H1 1573 aa16.54■□□□□ 0.24
HLA-DPB1-216ENST00000488575 ANKRD13DQ6ZTN6 518 aa16.53■□□□□ 0.24
HLA-DPB1-216ENST00000488575 CLMNQ96JQ2 1002 aa16.53■□□□□ 0.24
HLA-DPB1-216ENST00000488575 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
HLA-DPB1-216ENST00000488575 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 DACT2Q5SW24 774 aa16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 NKX2-3Q8TAU0 364 aa16.52■□□□□ 0.24
HLA-DPB1-216ENST00000488575 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 SASH1O94885 1247 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 SH3TC2Q8TF17 1288 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 FAM89AQ96GI7 184 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
HLA-DPB1-216ENST00000488575 XDHP47989 1333 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 GNRH1P01148 92 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ANXA1P04083 346 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 GJA5P36382 358 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 XAGE3Q8WTP9 111 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ZBED3Q96IU2 234 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 PPP2R3BQ9Y5P8 575 aa16.5■□□□□ 0.23
HLA-DPB1-216ENST00000488575 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
HLA-DPB1-216ENST00000488575 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
HLA-DPB1-216ENST00000488575 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 GJA8P48165 433 aa16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 PRMT2P55345 433 aa16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ISCA1Q9BUE6 129 aa16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
HLA-DPB1-216ENST00000488575 DEFB123Q8N688 67 aa16.47■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MUC3AQ02505 3323 aa16.47■□□□□ 0.23
HLA-DPB1-216ENST00000488575 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MTFR1Q15390 333 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 TAF1CQ15572 869 aaPredicted RBP16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 MXD3Q9BW11 206 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 TTC28Q96AY4 2481 aa16.46■□□□□ 0.23
HLA-DPB1-216ENST00000488575 GJB1P08034 283 aa16.45■□□□□ 0.22
HLA-DPB1-216ENST00000488575 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
HLA-DPB1-216ENST00000488575 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
HLA-DPB1-216ENST00000488575 SUPT20HL1Q3ZLR7 823 aa16.45■□□□□ 0.22
HLA-DPB1-216ENST00000488575 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
HLA-DPB1-216ENST00000488575 EYSQ5T1H1 3165 aa16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 KIF22Q14807 665 aa16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ZNF428Q96B54 188 aa16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
HLA-DPB1-216ENST00000488575 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 BMP8BP34820 402 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 BRI3BPQ8WY22 251 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 COA1Q9GZY4 146 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 PRDM6Q9NQX0 595 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 MTMR10Q9NXD2 777 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ALPK3Q96L96 1907 aa16.43■□□□□ 0.22
HLA-DPB1-216ENST00000488575 TLR2O60603 784 aa16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 NEFMP07197 916 aa16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 MTMR14Q8NCE2 650 aa16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 OPTNQ96CV9 577 aa16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 ZCCHC17Q9NP64 241 aaKnown RBP16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
HLA-DPB1-216ENST00000488575 EVI5O60447 810 aa16.41■□□□□ 0.22
HLA-DPB1-216ENST00000488575 FARP2O94887 1054 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPB1-216ENST00000488575 GTF2A2P52657 109 aa16.41■□□□□ 0.22
HLA-DPB1-216ENST00000488575 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms