RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 TLR1Q15399 786 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 SLC27A3Q5K4L6 730 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 FAM200AQ8TCP9 573 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 USP6P35125 1406 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 RREB1Q92766 1687 aa9.03□□□□□ -0.96
TNFSF4-203ENST00000488053 PARP4Q9UKK3 1724 aaKnown RBP9.02□□□□□ -0.96
TNFSF4-203ENST00000488053 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
TNFSF4-203ENST00000488053 SMTNP53814 917 aa9.02□□□□□ -0.97
TNFSF4-203ENST00000488053 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
TNFSF4-203ENST00000488053 EVC2Q86UK5 1308 aa9.02□□□□□ -0.97
TNFSF4-203ENST00000488053 AKAP12Q02952 1782 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 ROCK2O75116 1388 aaKnown RBP9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 SLIT3O75094 1523 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 SBF2Q86WG5 1849 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 CRB1P82279 1406 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 TOM1L2Q6ZVM7 507 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 ARXQ96QS3 562 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 COL18A1P39060 1754 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
TNFSF4-203ENST00000488053 MTFR1Q15390 333 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9□□□□□ -0.97
TNFSF4-203ENST00000488053 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 NBPF15Q8N660 670 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 DNMT3LQ9UJW3 386 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 ZMIZ1Q9ULJ6 1067 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 THRAP3Q9Y2W1 955 aaKnown RBP9□□□□□ -0.97
TNFSF4-203ENST00000488053 PEAK1Q9H792 1746 aa9□□□□□ -0.97
TNFSF4-203ENST00000488053 AATKQ6ZMQ8 1374 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 PARD3Q8TEW0 1356 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 A6NJY4 79 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 DDB1Q16531 1140 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 GNASQ5JWF2 1037 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 TMEM214Q6NUQ4 689 aaKnown RBP8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
TNFSF4-203ENST00000488053 OVOS2A0A0G2JMS6 1433 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 OVOS2A0A0J9YW53 1432 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 OVOS2Q6IE36 1432 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 FIGNL2A6NMB9 653 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 CDK2AP1O14519 115 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 PTF1AQ7RTS3 328 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 TSEN2Q8NCE0 465 aaKnown RBP8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 SCHIP1Q9P0W5 487 aaPredicted RBP8.98□□□□□ -0.97
TNFSF4-203ENST00000488053 CPSF1Q10570 1443 aaKnown RBP8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 EPHA4P54764 986 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 SWI5Q1ZZU3 235 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 WDR44Q5JSH3 913 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 ARHGEF25Q86VW2 580 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 WDR17Q8IZU2 1322 aa8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 KTN1Q86UP2 1357 aaKnown RBP8.97□□□□□ -0.97
TNFSF4-203ENST00000488053 KAT6BQ8WYB5 2073 aa8.96□□□□□ -0.97
TNFSF4-203ENST00000488053 POTECB2RU33 542 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 FOXK2Q01167 660 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 PRICKLE2Q7Z3G6 844 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 MARCH10Q8NA82 808 aaPredicted RBP8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 MON2Q7Z3U7 1717 aa8.96□□□□□ -0.98
TNFSF4-203ENST00000488053 NFAT5O94916 1531 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 LTN1O94822 1766 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 ZNF787Q6DD87 383 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 KCNH5Q8NCM2 988 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 PPP1R1BQ9UD71 204 aaPredicted RBP8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
TNFSF4-203ENST00000488053 SOBPA7XYQ1 873 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 NME9Q86XW9 330 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 SLC9A9Q8IVB4 645 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 CARD11Q9BXL7 1154 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 USTQ9Y2C2 406 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 RGPD3A6NKT7 1758 aaPredicted RBP8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 RGPD4Q7Z3J3 1758 aa8.94□□□□□ -0.98
TNFSF4-203ENST00000488053 KCNQ2O43526 872 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 PDE4CQ08493 712 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 POU4F2Q12837 409 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 CARD10Q9BWT7 1032 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 PDGFDQ9GZP0 370 aaPredicted RBP8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 SPON1Q9HCB6 807 aa8.93□□□□□ -0.98
TNFSF4-203ENST00000488053 CHMP3Q9Y3E7 222 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms