RNA–Protein interactions for RNA: ENST00000486946.1

AGAP3-220, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-220ENST00000486946 CAP1Q01518 475 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 ARHGEF6Q15052 776 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
AGAP3-220ENST00000486946 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 PRO3102Q9H379 93 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
AGAP3-220ENST00000486946 PTCH2Q9Y6C5 1203 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 COL4A1P02462 1669 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 A0A0C4DFX4 3053 aa15.18■□□□□ 0.02
AGAP3-220ENST00000486946 WNK4Q96J92 1243 aa15.17■□□□□ 0.02
AGAP3-220ENST00000486946 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
AGAP3-220ENST00000486946 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 WTIPA6NIX2 430 aaPredicted RBP15.16■□□□□ 0.02
AGAP3-220ENST00000486946 CHL1O00533 1208 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 WNT10BO00744 389 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
AGAP3-220ENST00000486946 RALBP1Q15311 655 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 ANKIB1Q9P2G1 1089 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 GGA1Q9UJY5 639 aa15.16■□□□□ 0.02
AGAP3-220ENST00000486946 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
AGAP3-220ENST00000486946 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
AGAP3-220ENST00000486946 CENPFP49454 3210 aa15.15■□□□□ 0.02
AGAP3-220ENST00000486946 A0A1W2PPC1 479 aa15.14■□□□□ 0.01
AGAP3-220ENST00000486946 SOX1O00570 391 aaPredicted RBP15.14■□□□□ 0.01
AGAP3-220ENST00000486946 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
AGAP3-220ENST00000486946 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
AGAP3-220ENST00000486946 FZD1Q9UP38 647 aa15.14■□□□□ 0.01
AGAP3-220ENST00000486946 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
AGAP3-220ENST00000486946 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
AGAP3-220ENST00000486946 PSME4Q14997 1843 aa15.14■□□□□ 0.01
AGAP3-220ENST00000486946 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 HDGFL1Q5TGJ6 251 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 LRCH3Q96II8 777 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 NR2E3Q9Y5X4 410 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 BRCA2P51587 3418 aa15.13■□□□□ 0.01
AGAP3-220ENST00000486946 SASH1O94885 1247 aa15.12■□□□□ 0.01
AGAP3-220ENST00000486946 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
AGAP3-220ENST00000486946 FAM89AQ96GI7 184 aa15.12■□□□□ 0.01
AGAP3-220ENST00000486946 COL25A1Q9BXS0 654 aaPredicted RBP15.12■□□□□ 0.01
AGAP3-220ENST00000486946 UNCXA6NJT0 531 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 ATP5J2-PTCD1G3V325 749 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 PPP1R12BO60237 982 aaPredicted RBP15.11■□□□□ 0.01
AGAP3-220ENST00000486946 HOXB7P09629 217 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 PTPN18Q99952 460 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
AGAP3-220ENST00000486946 COL6A3P12111 3177 aa15.11■□□□□ 0.01
AGAP3-220ENST00000486946 RANBP2P49792 3224 aaKnown RBP15.1■□□□□ 0.01
AGAP3-220ENST00000486946 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
AGAP3-220ENST00000486946 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
AGAP3-220ENST00000486946 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
AGAP3-220ENST00000486946 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
AGAP3-220ENST00000486946 DBF4Q9UBU7 674 aaPredicted RBP15.1■□□□□ 0.01
AGAP3-220ENST00000486946 LAMB1P07942 1786 aa15.1■□□□□ 0.01
AGAP3-220ENST00000486946 TESPA1A2RU30 521 aaPredicted RBP15.09■□□□□ 0.01
AGAP3-220ENST00000486946 GJA5P36382 358 aa15.09■□□□□ 0.01
AGAP3-220ENST00000486946 MMP14P50281 582 aa15.09■□□□□ 0.01
AGAP3-220ENST00000486946 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
AGAP3-220ENST00000486946 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
AGAP3-220ENST00000486946 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
AGAP3-220ENST00000486946 DUSP27Q5VZP5 1158 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 FBXW7Q969H0 707 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 DEFB129Q9H1M3 183 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 HYPKQ9NX55 129 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 STXBP5LQ9Y2K9 1186 aa15.08■□□□□ 0
AGAP3-220ENST00000486946 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0
AGAP3-220ENST00000486946 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
AGAP3-220ENST00000486946 ATP2B4P23634 1241 aa15.07■□□□□ 0
AGAP3-220ENST00000486946 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
AGAP3-220ENST00000486946 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
AGAP3-220ENST00000486946 TAF1CQ15572 869 aaPredicted RBP15.07■□□□□ 0
AGAP3-220ENST00000486946 GPR153Q6NV75 609 aa15.07■□□□□ 0
AGAP3-220ENST00000486946 UBE2Q1Q7Z7E8 422 aa15.07■□□□□ 0
AGAP3-220ENST00000486946 DEFB123Q8N688 67 aa15.07■□□□□ 0
AGAP3-220ENST00000486946 XDHP47989 1333 aa15.07■□□□□ 0
AGAP3-220ENST00000486946 ANP32CO43423 234 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 IREB2P48200 963 aaKnown RBP15.06■□□□□ 0
AGAP3-220ENST00000486946 KIF22Q14807 665 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 MTFR1Q15390 333 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 MBIPQ9NS73 344 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
AGAP3-220ENST00000486946 SUPT20HL1Q3ZLR7 823 aa15.05■□□□□ -0
AGAP3-220ENST00000486946 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ -0
AGAP3-220ENST00000486946 PPP2R3BQ9Y5P8 575 aa15.05■□□□□ -0
AGAP3-220ENST00000486946 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
AGAP3-220ENST00000486946 SSC5DA1L4H1 1573 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms