RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TTC14Q96N46 770 aa13.95□□□□□ -0.18
PRKCB-207ENST00000486868 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 SLC27A2O14975 620 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
PRKCB-207ENST00000486868 MCAMP43121 646 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 ZAP70P43403 619 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKCB-207ENST00000486868 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 PRPF40BQ6NWY9 871 aaKnown RBP13.94□□□□□ -0.18
PRKCB-207ENST00000486868 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
PRKCB-207ENST00000486868 MINPP1Q9UNW1 487 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
PRKCB-207ENST00000486868 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
PRKCB-207ENST00000486868 SEMA3EO15041 775 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 PHKA1P46020 1223 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 KCNJ4P48050 445 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 SCARF1Q14162 830 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 CNBD1Q8NA66 436 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 FBXO41Q8TF61 875 aa13.93□□□□□ -0.18
PRKCB-207ENST00000486868 ZSCAN31Q96LW9 406 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-207ENST00000486868 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
PRKCB-207ENST00000486868 RPAP1Q9BWH6 1393 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-207ENST00000486868 KLRG2A4D1S0 409 aaPredicted RBP13.92□□□□□ -0.18
PRKCB-207ENST00000486868 PHF14O94880 888 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 ADD2P35612 726 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 ST5P78524 1137 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 NUCB2P80303 420 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 NLGN1Q8N2Q7 840 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 SPATA5Q8NB90 893 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 CTNNA3Q9UI47 895 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 CYP46A1Q9Y6A2 500 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 NDUFB9Q9Y6M9 179 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 ARAP2Q8WZ64 1704 aa13.92□□□□□ -0.18
PRKCB-207ENST00000486868 UBR3Q6ZT12 1888 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 C4AP0C0L4 1744 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 APBA3O96018 575 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 GRAPQ13588 217 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 PRR5LQ6MZQ0 368 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 SMIM5Q71RC9 77 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 SH2B1Q9NRF2 756 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-207ENST00000486868 LIMCH1Q9UPQ0 1083 aa13.91□□□□□ -0.18
PRKCB-207ENST00000486868 MAST3O60307 1309 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 SERPINB2P05120 415 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 HSPD1P10809 573 aaKnown RBP13.9□□□□□ -0.18
PRKCB-207ENST00000486868 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
PRKCB-207ENST00000486868 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 CAVIN4Q5BKX8 364 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
PRKCB-207ENST00000486868 FBXO33Q7Z6M2 555 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 OSBP2Q969R2 916 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
PRKCB-207ENST00000486868 LEMD3Q9Y2U8 911 aa13.9□□□□□ -0.18
PRKCB-207ENST00000486868 NPHP1O15259 732 aa13.89□□□□□ -0.19
PRKCB-207ENST00000486868 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
PRKCB-207ENST00000486868 CASTP20810 708 aaKnown RBP13.89□□□□□ -0.19
PRKCB-207ENST00000486868 RASGRF1Q13972 1273 aa13.89□□□□□ -0.19
PRKCB-207ENST00000486868 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
PRKCB-207ENST00000486868 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
PRKCB-207ENST00000486868 PDRG1Q9NUG6 133 aa13.89□□□□□ -0.19
PRKCB-207ENST00000486868 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
PRKCB-207ENST00000486868 DENND2AQ9ULE3 1009 aa13.89□□□□□ -0.19
PRKCB-207ENST00000486868 ZMYM6O95789 1325 aa13.89□□□□□ -0.19
PRKCB-207ENST00000486868 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
PRKCB-207ENST00000486868 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
PRKCB-207ENST00000486868 BBOX1O75936 387 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 PTMSP20962 102 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 RPS6KB1P23443 525 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 ALX1Q15699 326 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 BLOC1S2Q6QNY1 142 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 FBXL16Q8N461 479 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
PRKCB-207ENST00000486868 CRAMP1Q96RY5 1269 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 PIH1D3Q9NQM4 214 aaKnown RBP13.88□□□□□ -0.19
PRKCB-207ENST00000486868 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
PRKCB-207ENST00000486868 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 M0R2C6 588 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 CYP21A2P08686 494 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 PDE6AP16499 860 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 BCAMP50895 628 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 AK2P54819 239 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 WASHC4Q2M389 1173 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 ADCK5Q3MIX3 580 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 SLC9C2Q5TAH2 1124 aa13.87□□□□□ -0.19
PRKCB-207ENST00000486868 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms