RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
CTSA-208ENST00000485627 HAUS7Q99871 368 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 BSDC1Q9NW68 430 aaPredicted RBP11.55□□□□□ -0.56
CTSA-208ENST00000485627 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
CTSA-208ENST00000485627 RIC1Q4ADV7 1423 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 MCCP23508 829 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 RPS8P62241 208 aaKnown RBP11.54□□□□□ -0.56
CTSA-208ENST00000485627 HTRA3P83110 453 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 CHRNDQ07001 517 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
CTSA-208ENST00000485627 COL13A1Q5TAT6 717 aaPredicted RBP11.54□□□□□ -0.56
CTSA-208ENST00000485627 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 VGLL2Q8N8G2 317 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
CTSA-208ENST00000485627 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
CTSA-208ENST00000485627 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
CTSA-208ENST00000485627 ADORA1P30542 326 aa11.53□□□□□ -0.56
CTSA-208ENST00000485627 RBM25P49756 843 aaKnown RBP11.53□□□□□ -0.56
CTSA-208ENST00000485627 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
CTSA-208ENST00000485627 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
CTSA-208ENST00000485627 RBM17Q96I25 401 aaKnown RBP11.53□□□□□ -0.56
CTSA-208ENST00000485627 ANO2Q9NQ90 1003 aa11.53□□□□□ -0.56
CTSA-208ENST00000485627 TAF5LO75529 589 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 UQCRFS1P1P0C7P4 283 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 KCNJ4P48050 445 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
CTSA-208ENST00000485627 DDR1Q08345 913 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 BECN1Q14457 450 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 CELF1Q92879 486 aaKnown RBP11.52□□□□□ -0.57
CTSA-208ENST00000485627 USP26Q9BXU7 913 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
CTSA-208ENST00000485627 GOLIM4O00461 696 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 MMP10P09238 476 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 FGFR2P21802 821 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 GRAPQ13588 217 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 UBE4AQ14139 1066 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 TICAM2Q86XR7 235 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
CTSA-208ENST00000485627 MINPP1Q9UNW1 487 aa11.51□□□□□ -0.57
CTSA-208ENST00000485627 SGSM2O43147 1006 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
CTSA-208ENST00000485627 TTF1Q15361 905 aaPredicted RBP11.5□□□□□ -0.57
CTSA-208ENST00000485627 CAVIN4Q5BKX8 364 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 VPS37DQ86XT2 251 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 EDC3Q96F86 508 aaKnown RBP11.5□□□□□ -0.57
CTSA-208ENST00000485627 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
CTSA-208ENST00000485627 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 GNL3LQ9NVN8 582 aaKnown RBP11.5□□□□□ -0.57
CTSA-208ENST00000485627 RAD50Q92878 1312 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
CTSA-208ENST00000485627 PDE6BP35913 854 aa11.49□□□□□ -0.57
CTSA-208ENST00000485627 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
CTSA-208ENST00000485627 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
CTSA-208ENST00000485627 CD2APQ9Y5K6 639 aa11.49□□□□□ -0.57
CTSA-208ENST00000485627 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
CTSA-208ENST00000485627 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 BBOX1O75936 387 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 ZFYP08048 801 aaPredicted RBP11.48□□□□□ -0.57
CTSA-208ENST00000485627 ARID4AP29374 1257 aaPredicted RBP11.48□□□□□ -0.57
CTSA-208ENST00000485627 ZAP70P43403 619 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 PHKA1P46020 1223 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 APLP1P51693 650 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 CRY2Q49AN0 593 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 ZSCAN25Q6NSZ9 544 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTSA-208ENST00000485627 TMX4Q9H1E5 349 aaPredicted RBP11.48□□□□□ -0.57
CTSA-208ENST00000485627 ANKIB1Q9P2G1 1089 aa11.48□□□□□ -0.57
CTSA-208ENST00000485627 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
CTSA-208ENST00000485627 SNAP23O00161 211 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 FRAT2O75474 233 aaPredicted RBP11.47□□□□□ -0.57
CTSA-208ENST00000485627 NPR1P16066 1061 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 MCAMP43121 646 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 BCAMP50895 628 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 FAM227BQ96M60 508 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 CRAMP1Q96RY5 1269 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
CTSA-208ENST00000485627 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 RNF113AO15541 343 aaKnown RBP11.46□□□□□ -0.57
CTSA-208ENST00000485627 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
CTSA-208ENST00000485627 SCARF1Q14162 830 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 RABEP1Q15276 862 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 MCMDC2Q4G0Z9 681 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 HSCBQ8IWL3 235 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 SPATA5Q8NB90 893 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 SPOCK2Q92563 424 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
CTSA-208ENST00000485627 ZNF804BA4D1E1 1349 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 XDHP47989 1333 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 SPEF2Q9C093 1822 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 DSG3P32926 999 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms