RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 SAFB2Q14151 953 aaKnown RBP eCLIP7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 ERFEQ4G0M1 354 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 TMC4Q7Z404 712 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 SLC43A3Q8NBI5 491 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 DMRTB1Q96MA1 342 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 POLR3GLQ9BT43 218 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 TMA7Q9Y2S6 64 aaKnown RBP7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 CHD4Q14839 1912 aa7.56□□□□□ -1.2
NHLRC3-205ENST00000485407 NPHP3Q7Z494 1330 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 KCNQ2O43526 872 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 RAB15P59190 212 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 DAB2P98082 770 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 FANCCQ00597 558 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 PTCRAQ6ISU1 281 aaPredicted RBP7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 UNC5CLQ8IV45 518 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 CCDC87Q9NVE4 849 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 NLRP2Q9NX02 1062 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.55□□□□□ -1.2
NHLRC3-205ENST00000485407 EVC2Q86UK5 1308 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 TULP4Q9NRJ4 1543 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 EIF1AXP47813 144 aaKnown RBP7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 TRIM32Q13049 653 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 DSC3Q14574 896 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 ZNF787Q6DD87 383 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 C16orf46Q6P387 395 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 ORAI2Q96SN7 254 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 CDK19Q9BWU1 502 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 KIF1AQ12756 1690 aa7.54□□□□□ -1.2
NHLRC3-205ENST00000485407 SOS2Q07890 1332 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 DNAJA1P31689 397 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 PDE3BQ13370 1112 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 EZH2Q15910 746 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 CCDC144BQ3MJ40 725 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 TNS4Q8IZW8 715 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 PMFBP1Q8TBY8 1022 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 BAP1Q92560 729 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 NUDT16Q96DE0 195 aaKnown RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 SAP130Q9H0E3 1048 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 QRICH2Q9H0J4 1663 aa7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 RGPD8O14715 1765 aaPredicted RBP7.53□□□□□ -1.2
NHLRC3-205ENST00000485407 COL22A1Q8NFW1 1626 aaPredicted RBP7.52□□□□□ -1.2
NHLRC3-205ENST00000485407 RGPD1P0DJD0 1748 aa7.52□□□□□ -1.2
NHLRC3-205ENST00000485407 ITSN1Q15811 1721 aa7.52□□□□□ -1.2
NHLRC3-205ENST00000485407 USP47Q96K76 1375 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 ST20-MTHFSA0A0A6YYL1 179 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 ESPNB1AK53 854 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 BACH1O14867 736 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 FZD6O60353 706 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 LINC01559Q495D7 138 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 ZNF662Q6ZS27 426 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 CAMKK2Q96RR4 588 aa7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
NHLRC3-205ENST00000485407 ATP7BP35670 1465 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 BRD4O60885 1362 aaPredicted RBP7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 PARD3Q8TEW0 1356 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 WNT7AO00755 349 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 HSPA6P17066 643 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 TNNI2P48788 182 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 TESK2Q96S53 571 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 NIF3L1Q9GZT8 377 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 STIM2Q9P246 746 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 USP32Q8NFA0 1604 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 SLIT2O94813 1529 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 PRR36Q9H6K5 1346 aa7.51□□□□□ -1.21
NHLRC3-205ENST00000485407 MARF1Q9Y4F3 1742 aaKnown RBP7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 POLR3AO14802 1390 aaPredicted RBP7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 TLDC2A0PJX2 215 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 TMEM229AB2RXF0 380 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 GPR182O15218 404 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 ST8SIA5O15466 376 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 TMF1P82094 1093 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 AAASQ9NRG9 546 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 INPP5FQ9Y2H2 1132 aa7.5□□□□□ -1.21
NHLRC3-205ENST00000485407 SBNO1A3KN83 1393 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 PNMA6FA0A0J9YX94 578 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 PPP1R12BO60237 982 aaPredicted RBP7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 AVPP01185 164 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 VPS72Q15906 364 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 COL13A1Q5TAT6 717 aaPredicted RBP7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 ALG1LQ6GMV1 187 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 KRT28Q7Z3Y7 464 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 CRIPAKQ8N1N5 446 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms