RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 IRS4O14654 1257 aaPredicted RBP23.59■■□□□ 1.37
DDR1-245ENST00000484556 CRHR2Q13324 411 aa23.58■■□□□ 1.37
DDR1-245ENST00000484556 ZNF333Q96JL9 665 aa23.58■■□□□ 1.37
DDR1-245ENST00000484556 PLEKHF1Q96S99 279 aa23.58■■□□□ 1.37
DDR1-245ENST00000484556 MYCP01106 439 aaPredicted RBP23.57■■□□□ 1.36
DDR1-245ENST00000484556 FBXW7Q969H0 707 aa23.57■■□□□ 1.36
DDR1-245ENST00000484556 INHBEP58166 350 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 PODNQ7Z5L7 613 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 SLC10A4Q96EP9 437 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 WNK4Q96J92 1243 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 CLMNQ96JQ2 1002 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 CHPF2Q9P2E5 772 aa23.56■■□□□ 1.36
DDR1-245ENST00000484556 KRT24Q2M2I5 525 aa23.55■■□□□ 1.36
DDR1-245ENST00000484556 DACT2Q5SW24 774 aa23.55■■□□□ 1.36
DDR1-245ENST00000484556 OGFOD1Q8N543 542 aa23.55■■□□□ 1.36
DDR1-245ENST00000484556 PLBD2Q8NHP8 589 aa23.55■■□□□ 1.36
DDR1-245ENST00000484556 CCDC85AQ96PX6 553 aaPredicted RBP23.55■■□□□ 1.36
DDR1-245ENST00000484556 WTIPA6NIX2 430 aaPredicted RBP23.54■■□□□ 1.36
DDR1-245ENST00000484556 SLC4A8Q2Y0W8 1093 aa23.54■■□□□ 1.36
DDR1-245ENST00000484556 RBM27Q9P2N5 1060 aaKnown RBP23.54■■□□□ 1.36
DDR1-245ENST00000484556 RANBP2P49792 3224 aaKnown RBP23.54■■□□□ 1.36
DDR1-245ENST00000484556 XDHP47989 1333 aa23.54■■□□□ 1.36
DDR1-245ENST00000484556 SPEF2Q9C093 1822 aa23.54■■□□□ 1.36
DDR1-245ENST00000484556 SSC5DA1L4H1 1573 aa23.53■■□□□ 1.36
DDR1-245ENST00000484556 ZBTB48P10074 688 aaPredicted RBP23.53■■□□□ 1.36
DDR1-245ENST00000484556 SP3Q02447 781 aa23.53■■□□□ 1.36
DDR1-245ENST00000484556 ANKRD13DQ6ZTN6 518 aa23.53■■□□□ 1.36
DDR1-245ENST00000484556 APOBEC3FQ8IUX4 373 aaKnown RBP23.53■■□□□ 1.36
DDR1-245ENST00000484556 PTCH2Q9Y6C5 1203 aa23.53■■□□□ 1.36
DDR1-245ENST00000484556 SLC9C1Q4G0N8 1177 aa23.52■■□□□ 1.36
DDR1-245ENST00000484556 MAPK8IP3Q9UPT6 1336 aa23.52■■□□□ 1.36
DDR1-245ENST00000484556 COL6A3P12111 3177 aa23.52■■□□□ 1.36
DDR1-245ENST00000484556 ATP2B4P23634 1241 aa23.5■■□□□ 1.35
DDR1-245ENST00000484556 ZSWIM8A7E2V4 1837 aa23.49■■□□□ 1.35
DDR1-245ENST00000484556 GJA5P36382 358 aa23.49■■□□□ 1.35
DDR1-245ENST00000484556 MED23Q9ULK4 1368 aa23.49■■□□□ 1.35
DDR1-245ENST00000484556 PTPN18Q99952 460 aa23.48■■□□□ 1.35
DDR1-245ENST00000484556 MYO3BQ8WXR4 1341 aa23.48■■□□□ 1.35
DDR1-245ENST00000484556 COL1A1P02452 1464 aaPredicted RBP23.48■■□□□ 1.35
DDR1-245ENST00000484556 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 CCDC152Q4G0S7 254 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 OTUD7BQ6GQQ9 843 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 NBPF11Q86T75 865 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 KIAA0825Q8IV33 1275 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 A0A0C4DFX4 3053 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
DDR1-245ENST00000484556 HDGFL1Q5TGJ6 251 aa23.46■■□□□ 1.35
DDR1-245ENST00000484556 STRIP1Q5VSL9 837 aa23.46■■□□□ 1.35
DDR1-245ENST00000484556 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
DDR1-245ENST00000484556 ZBTB38Q8NAP3 1195 aaPredicted RBP23.46■■□□□ 1.35
DDR1-245ENST00000484556 JARID2Q92833 1246 aaPredicted RBP23.46■■□□□ 1.35
DDR1-245ENST00000484556 DEFB129Q9H1M3 183 aa23.46■■□□□ 1.35
DDR1-245ENST00000484556 ECM29Q5VYK3 1845 aa23.45■■□□□ 1.34
DDR1-245ENST00000484556 SH3TC2Q8TF17 1288 aa23.45■■□□□ 1.34
DDR1-245ENST00000484556 ZBED3Q96IU2 234 aaPredicted RBP23.45■■□□□ 1.34
DDR1-245ENST00000484556 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.34
DDR1-245ENST00000484556 CUL9Q8IWT3 2517 aa23.44■■□□□ 1.34
DDR1-245ENST00000484556 PPP1R12BO60237 982 aaPredicted RBP23.44■■□□□ 1.34
DDR1-245ENST00000484556 RIPK4P57078 832 aa23.44■■□□□ 1.34
DDR1-245ENST00000484556 DPF3Q92784 378 aa23.44■■□□□ 1.34
DDR1-245ENST00000484556 TRIM28Q13263 835 aaKnown RBP23.43■■□□□ 1.34
DDR1-245ENST00000484556 TXNRD3Q86VQ6 643 aa23.42■■□□□ 1.34
DDR1-245ENST00000484556 PDE8AO60658 829 aa23.41■■□□□ 1.34
DDR1-245ENST00000484556 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
DDR1-245ENST00000484556 PCDHAC2Q9Y5I4 1007 aa23.41■■□□□ 1.34
DDR1-245ENST00000484556 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
DDR1-245ENST00000484556 TTLL5Q6EMB2 1281 aa23.4■■□□□ 1.34
DDR1-245ENST00000484556 SHISA4Q96DD7 197 aa23.4■■□□□ 1.34
DDR1-245ENST00000484556 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
DDR1-245ENST00000484556 CLRN2A0PK11 232 aa23.39■■□□□ 1.33
DDR1-245ENST00000484556 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
DDR1-245ENST00000484556 KLRK1P26718 216 aa23.39■■□□□ 1.33
DDR1-245ENST00000484556 CCT4P50991 539 aaKnown RBP23.39■■□□□ 1.33
DDR1-245ENST00000484556 NBPF12Q5TAG4 269 aaPredicted RBP23.39■■□□□ 1.33
DDR1-245ENST00000484556 MYD88Q99836 296 aa23.39■■□□□ 1.33
DDR1-245ENST00000484556 PRO3102Q9H379 93 aa23.39■■□□□ 1.33
DDR1-245ENST00000484556 MINPP1Q9UNW1 487 aa23.39■■□□□ 1.33
DDR1-245ENST00000484556 IREB2P48200 963 aaKnown RBP23.38■■□□□ 1.33
DDR1-245ENST00000484556 GTF2IP78347 998 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 ARHGEF6Q15052 776 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 DLGAP5Q15398 846 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 TAF1CQ15572 869 aaPredicted RBP23.38■■□□□ 1.33
DDR1-245ENST00000484556 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 ARHGAP39Q9C0H5 1083 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 ELP3Q9H9T3 547 aa23.38■■□□□ 1.33
DDR1-245ENST00000484556 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
DDR1-245ENST00000484556 SOX1O00570 391 aaPredicted RBP23.37■■□□□ 1.33
DDR1-245ENST00000484556 USP2O75604 605 aaPredicted RBP23.37■■□□□ 1.33
DDR1-245ENST00000484556 PCCAP05165 728 aaPredicted RBP23.37■■□□□ 1.33
DDR1-245ENST00000484556 MMP14P50281 582 aa23.37■■□□□ 1.33
DDR1-245ENST00000484556 OPTNQ96CV9 577 aa23.37■■□□□ 1.33
DDR1-245ENST00000484556 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
DDR1-245ENST00000484556 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
DDR1-245ENST00000484556 PPP2R3BQ9Y5P8 575 aa23.37■■□□□ 1.33
DDR1-245ENST00000484556 ANKRD13AQ8IZ07 590 aa23.36■■□□□ 1.33
DDR1-245ENST00000484556 BRI3BPQ8WY22 251 aa23.36■■□□□ 1.33
DDR1-245ENST00000484556 MS4A4AQ96JQ5 239 aa23.36■■□□□ 1.33
DDR1-245ENST00000484556 CDC5LQ99459 802 aaKnown RBP23.36■■□□□ 1.33
DDR1-245ENST00000484556 VEZTQ9HBM0 779 aa23.36■■□□□ 1.33
DDR1-245ENST00000484556 ZFYVE28Q9HCC9 887 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms