RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 ADAM11O75078 769 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 ADAMTS4O75173 837 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 EPHA1P21709 976 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 RNF43Q68DV7 783 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 TRIM42Q8IWZ5 723 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 MYRFLQ96LU7 910 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 ADAM19Q9H013 955 aa8.93□□□□□ -0.98
COMMD3-213ENST00000483684 ABI2Q9NYB9 513 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-213ENST00000483684 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
COMMD3-213ENST00000483684 SCNN1AP37088 669 aa8.92□□□□□ -0.98
COMMD3-213ENST00000483684 TXKP42681 527 aa8.92□□□□□ -0.98
COMMD3-213ENST00000483684 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
COMMD3-213ENST00000483684 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
COMMD3-213ENST00000483684 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
COMMD3-213ENST00000483684 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
COMMD3-213ENST00000483684 HMX2A2RU54 273 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 ZBTB39O15060 712 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 DDX3YO15523 660 aaKnown RBP8.91□□□□□ -0.98
COMMD3-213ENST00000483684 TAL1P17542 331 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-213ENST00000483684 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-213ENST00000483684 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 DTX1Q86Y01 620 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 GPR152Q8TDT2 470 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
COMMD3-213ENST00000483684 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-213ENST00000483684 CDC25BP30305 580 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 FAM117BQ6P1L5 589 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 CLEC10AQ8IUN9 316 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 UBASH3BQ8TF42 649 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 KLHDC7BQ96G42 594 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
COMMD3-213ENST00000483684 FAM83CQ9BQN1 747 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 STIM2Q9P246 746 aa8.9□□□□□ -0.98
COMMD3-213ENST00000483684 GRIK1P39086 918 aa8.89□□□□□ -0.99
COMMD3-213ENST00000483684 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-213ENST00000483684 FAM20CQ8IXL6 584 aa8.89□□□□□ -0.99
COMMD3-213ENST00000483684 SEC31BQ9NQW1 1179 aa8.89□□□□□ -0.99
COMMD3-213ENST00000483684 PTPRAP18433 802 aa8.88□□□□□ -0.99
COMMD3-213ENST00000483684 PDE12Q6L8Q7 609 aaKnown RBP8.88□□□□□ -0.99
COMMD3-213ENST00000483684 WNT8BQ93098 351 aa8.88□□□□□ -0.99
COMMD3-213ENST00000483684 TMEM63CQ9P1W3 806 aa8.88□□□□□ -0.99
COMMD3-213ENST00000483684 SALL4Q9UJQ4 1053 aa8.88□□□□□ -0.99
COMMD3-213ENST00000483684 H3BRJ5 948 aa8.87□□□□□ -0.99
COMMD3-213ENST00000483684 NFKBIEO00221 500 aa8.87□□□□□ -0.99
COMMD3-213ENST00000483684 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
COMMD3-213ENST00000483684 ABTB2Q8N961 1025 aa8.87□□□□□ -0.99
COMMD3-213ENST00000483684 OSGEPQ9NPF4 335 aa8.87□□□□□ -0.99
COMMD3-213ENST00000483684 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
COMMD3-213ENST00000483684 PIP4K2BP78356 416 aa8.86□□□□□ -0.99
COMMD3-213ENST00000483684 ANKRD34AQ69YU3 496 aa8.86□□□□□ -0.99
COMMD3-213ENST00000483684 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
COMMD3-213ENST00000483684 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
COMMD3-213ENST00000483684 ELP3Q9H9T3 547 aa8.86□□□□□ -0.99
COMMD3-213ENST00000483684 ATG7O95352 703 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 BMP3P12645 472 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 PREPP48147 710 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 TMEM164Q5U3C3 297 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 CLP1Q92989 425 aaKnown RBP8.85□□□□□ -0.99
COMMD3-213ENST00000483684 CNTN3Q9P232 1028 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 HIF3AQ9Y2N7 669 aa8.85□□□□□ -0.99
COMMD3-213ENST00000483684 XKR5Q6UX68 686 aa8.84□□□□□ -0.99
COMMD3-213ENST00000483684 BEND4Q6ZU67 534 aa8.84□□□□□ -0.99
COMMD3-213ENST00000483684 NUDT16Q96DE0 195 aaKnown RBP8.84□□□□□ -0.99
COMMD3-213ENST00000483684 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
COMMD3-213ENST00000483684 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
COMMD3-213ENST00000483684 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
COMMD3-213ENST00000483684 WNT11O96014 354 aa8.83□□□□□ -1
COMMD3-213ENST00000483684 ACPPP15309 386 aa8.83□□□□□ -1
COMMD3-213ENST00000483684 YBX3P16989 372 aaKnown RBP eCLIP8.83□□□□□ -13e-6■□□□□ 10
COMMD3-213ENST00000483684 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
COMMD3-213ENST00000483684 MEGF11A6BM72 1044 aa8.82□□□□□ -1
COMMD3-213ENST00000483684 SART1O43290 800 aaKnown RBP8.82□□□□□ -1
COMMD3-213ENST00000483684 CABP4P57796 275 aa8.82□□□□□ -1
COMMD3-213ENST00000483684 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
COMMD3-213ENST00000483684 DZANK1Q9NVP4 752 aa8.82□□□□□ -1
COMMD3-213ENST00000483684 RNF114Q9Y508 228 aa8.82□□□□□ -1
COMMD3-213ENST00000483684 FAM177BA6PVY3 158 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 ZNF438Q7Z4V0 828 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 ATCAYQ86WG3 371 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 C1orf127Q8N9H9 656 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 ADGRE2Q9UHX3 823 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 SOX13Q9UN79 622 aa8.81□□□□□ -1
COMMD3-213ENST00000483684 HOXA10P31260 410 aaPredicted RBP8.8□□□□□ -1
COMMD3-213ENST00000483684 NLRP12P59046 1061 aa8.8□□□□□ -1
COMMD3-213ENST00000483684 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
COMMD3-213ENST00000483684 PDE2AO00408 941 aaPredicted RBP8.79□□□□□ -1
COMMD3-213ENST00000483684 RPLP1P05386 114 aaKnown RBP8.79□□□□□ -1
COMMD3-213ENST00000483684 HGSNATQ68CP4 663 aa8.79□□□□□ -1
COMMD3-213ENST00000483684 HHIPQ96QV1 700 aa8.79□□□□□ -1
COMMD3-213ENST00000483684 KRTAP4-9Q9BYQ8 210 aa8.79□□□□□ -1
COMMD3-213ENST00000483684 SEPT3Q9UH03 358 aa8.79□□□□□ -1
COMMD3-213ENST00000483684 WDR64B1ANS9 1081 aa8.78□□□□□ -1
COMMD3-213ENST00000483684 TRPA1O75762 1119 aa8.78□□□□□ -1
COMMD3-213ENST00000483684 FDX2Q6P4F2 183 aa8.78□□□□□ -1
COMMD3-213ENST00000483684 TMEM102Q8N9M5 508 aaPredicted RBP8.78□□□□□ -1
COMMD3-213ENST00000483684 CHRDQ9H2X0 955 aa8.78□□□□□ -1
COMMD3-213ENST00000483684 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms