RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 RGL4Q8IZJ4 473 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 CMTR1Q8N1G2 835 aaKnown RBP6.08□□□□□ -1.44
LRCH3-217ENST00000483442 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 ZMIZ1Q9ULJ6 1067 aa6.08□□□□□ -1.44
LRCH3-217ENST00000483442 EGFRP00533 1210 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 IREB2P48200 963 aaKnown RBP6.07□□□□□ -1.44
LRCH3-217ENST00000483442 OCLNQ16625 522 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 ETFBKMTQ8IXQ9 262 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 WFDC12Q8WWY7 111 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 TTC9Q92623 222 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 TLR7Q9NYK1 1049 aaKnown RBP6.07□□□□□ -1.44
LRCH3-217ENST00000483442 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
LRCH3-217ENST00000483442 ATP10BO94823 1461 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 RAPGEF2Q9Y4G8 1499 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 KIAA0556O60303 1618 aa6.07□□□□□ -1.44
LRCH3-217ENST00000483442 PLEKHD1A6NEE1 506 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 PRMT3O60678 531 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 MMP20O60882 483 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 XYLBO75191 536 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-217ENST00000483442 VTI1AQ96AJ9 217 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 MEGF10Q96KG7 1140 aa6.06□□□□□ -1.44
LRCH3-217ENST00000483442 DENND4BO75064 1496 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-217ENST00000483442 NEO1Q92859 1461 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 ALX3O95076 343 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
LRCH3-217ENST00000483442 NRLP54845 237 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 SRPK2P78362 688 aaKnown RBP6.05□□□□□ -1.44
LRCH3-217ENST00000483442 WFDC8Q8IUA0 241 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 DTWD1Q8N5C7 304 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 STK32AQ8WU08 396 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 NSUN5Q96P11 429 aaKnown RBP6.05□□□□□ -1.44
LRCH3-217ENST00000483442 ZFP64Q9NPA5 681 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 C11orf16Q9NQ32 467 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 AKNAQ7Z591 1439 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 ABCA8O94911 1581 aa6.05□□□□□ -1.44
LRCH3-217ENST00000483442 LOC102724428A0A0B4J2F2 783 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 DLL1O00548 723 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 TNFRSF10BO14763 440 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
LRCH3-217ENST00000483442 SIK1P57059 783 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 PIP4K2BP78356 416 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 PCSK7Q16549 785 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 ADAMTSL4Q6UY14 1074 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 PLD4Q96BZ4 506 aa6.04□□□□□ -1.44
LRCH3-217ENST00000483442 FANCAO15360 1455 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 GOLGA3Q08378 1498 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 HYAL3O43820 417 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-217ENST00000483442 HSPA1LP34931 641 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 COL13A1Q5TAT6 717 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-217ENST00000483442 GDF6Q6KF10 455 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-217ENST00000483442 IGF2-ASQ6U949 168 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 SLAIN2Q9P270 581 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 TRIM33Q9UPN9 1127 aa6.03□□□□□ -1.44
LRCH3-217ENST00000483442 ZNF335Q9H4Z2 1342 aaPredicted RBP6.02□□□□□ -1.45
LRCH3-217ENST00000483442 ACIN1Q9UKV3 1341 aaKnown RBP6.02□□□□□ -1.45
LRCH3-217ENST00000483442 PTPRTO14522 1441 aa6.02□□□□□ -1.45
LRCH3-217ENST00000483442 UHRF1BP1Q6BDS2 1440 aa6.02□□□□□ -1.45
LRCH3-217ENST00000483442 NAA30Q147X3 362 aaPredicted RBP6.02□□□□□ -1.45
LRCH3-217ENST00000483442 SETDB1Q15047 1291 aa6.02□□□□□ -1.45
LRCH3-217ENST00000483442 MKNK1Q9BUB5 465 aa6.02□□□□□ -1.45
LRCH3-217ENST00000483442 FRMPD1Q5SYB0 1578 aa6.01□□□□□ -1.45
LRCH3-217ENST00000483442 FHOD3Q2V2M9 1422 aa6.01□□□□□ -1.45
LRCH3-217ENST00000483442 STRCQ7RTU9 1775 aa6.01□□□□□ -1.45
LRCH3-217ENST00000483442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.01□□□□□ -1.45
LRCH3-217ENST00000483442 ZBTB39O15060 712 aa6.01□□□□□ -1.45
LRCH3-217ENST00000483442 IL22RA1Q8N6P7 574 aa6.01□□□□□ -1.45
LRCH3-217ENST00000483442 ABCA9Q8IUA7 1624 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 TM4SF5O14894 197 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 PSAPP07602 524 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 HOXD8P13378 290 aaPredicted RBP6□□□□□ -1.45
LRCH3-217ENST00000483442 LRP8Q14114 963 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 ELOAQ14241 798 aaKnown RBP6□□□□□ -1.45
LRCH3-217ENST00000483442 SWI5Q1ZZU3 235 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 C16orf46Q6P387 395 aa6□□□□□ -1.45
LRCH3-217ENST00000483442 DZIP1LQ8IYY4 767 aaKnown RBP6□□□□□ -1.45
LRCH3-217ENST00000483442 SCAPERQ9BY12 1400 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 LTBP4Q8N2S1 1624 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 ATP10AO60312 1499 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 F8W735 103 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 BRD2P25440 801 aaKnown RBP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 SOX18P35713 384 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 ATP11AP98196 1134 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 TMEM164Q5U3C3 297 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 PRR23CQ6ZRP0 262 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 NLRP13Q86W25 1043 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 AGGF1Q8N302 714 aaeCLIP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 AFAP1Q8N556 730 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 GALNT11Q8NCW6 608 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 AKTIPQ9H8T0 292 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 CXXC1Q9P0U4 656 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-217ENST00000483442 ZFYVE16Q7Z3T8 1539 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 ARHGEF40Q8TER5 1519 aa5.99□□□□□ -1.45
LRCH3-217ENST00000483442 TOM1O60784 492 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 GHRHP01286 108 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 CYP2E1P05181 493 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms