RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.52■■□□□ 1.84
RUNX1-216ENST00000482318 CHMP5Q9NZZ3 219 aa26.52■■□□□ 1.84
RUNX1-216ENST00000482318 COL4A1P02462 1669 aa26.52■■□□□ 1.84
RUNX1-216ENST00000482318 TNRC6CQ9HCJ0 1690 aaKnown RBP26.52■■□□□ 1.84
RUNX1-216ENST00000482318 PHKA1P46020 1223 aa26.51■■□□□ 1.83
RUNX1-216ENST00000482318 ZSCAN25Q6NSZ9 544 aa26.51■■□□□ 1.83
RUNX1-216ENST00000482318 PRPF40BQ6NWY9 871 aaKnown RBP26.51■■□□□ 1.83
RUNX1-216ENST00000482318 FBXO41Q8TF61 875 aa26.51■■□□□ 1.83
RUNX1-216ENST00000482318 HMG20BQ9P0W2 317 aa26.51■■□□□ 1.83
RUNX1-216ENST00000482318 RPS8P62241 208 aaKnown RBP26.51■■□□□ 1.83
RUNX1-216ENST00000482318 UBE4AQ14139 1066 aa26.5■■□□□ 1.83
RUNX1-216ENST00000482318 CREB3L3Q68CJ9 461 aa26.5■■□□□ 1.83
RUNX1-216ENST00000482318 RASEFQ8IZ41 740 aa26.5■■□□□ 1.83
RUNX1-216ENST00000482318 TM6SF1Q9BZW5 370 aa26.5■■□□□ 1.83
RUNX1-216ENST00000482318 CELF1Q92879 486 aaKnown RBP26.49■■□□□ 1.83
RUNX1-216ENST00000482318 CIZ1Q9ULV3 898 aaPredicted RBP26.49■■□□□ 1.83
RUNX1-216ENST00000482318 U3KPZ7 1027 aaPredicted RBP26.49■■□□□ 1.83
RUNX1-216ENST00000482318 ST5P78524 1137 aa26.48■■□□□ 1.83
RUNX1-216ENST00000482318 FLAD1Q8NFF5 587 aa26.48■■□□□ 1.83
RUNX1-216ENST00000482318 TFCP2L1Q9NZI6 479 aa26.48■■□□□ 1.83
RUNX1-216ENST00000482318 TM4SF1P30408 202 aa26.48■■□□□ 1.83
RUNX1-216ENST00000482318 SEC62Q99442 399 aaKnown RBP26.48■■□□□ 1.83
RUNX1-216ENST00000482318 UPF3BQ9BZI7 483 aaKnown RBP26.48■■□□□ 1.83
RUNX1-216ENST00000482318 RGS17Q9UGC6 210 aaPredicted RBP26.48■■□□□ 1.83
RUNX1-216ENST00000482318 MINPP1Q9UNW1 487 aa26.48■■□□□ 1.83
RUNX1-216ENST00000482318 PRR5LQ6MZQ0 368 aa26.47■■□□□ 1.83
RUNX1-216ENST00000482318 PI16Q6UXB8 463 aa26.47■■□□□ 1.83
RUNX1-216ENST00000482318 AKT1S1Q96B36 256 aa26.47■■□□□ 1.83
RUNX1-216ENST00000482318 ANKRD2Q9GZV1 360 aa26.47■■□□□ 1.83
RUNX1-216ENST00000482318 DOCK2Q92608 1830 aa26.46■■□□□ 1.83
RUNX1-216ENST00000482318 SLC27A2O14975 620 aa26.46■■□□□ 1.83
RUNX1-216ENST00000482318 PSMA5P28066 241 aa26.46■■□□□ 1.83
RUNX1-216ENST00000482318 DDIT3P35638 169 aa26.46■■□□□ 1.83
RUNX1-216ENST00000482318 DSCC1Q9BVC3 393 aa26.46■■□□□ 1.83
RUNX1-216ENST00000482318 SERPINB2P05120 415 aa26.45■■□□□ 1.83
RUNX1-216ENST00000482318 CYP2E1P05181 493 aaPredicted RBP26.45■■□□□ 1.83
RUNX1-216ENST00000482318 CCDC24Q8N4L8 307 aa26.45■■□□□ 1.83
RUNX1-216ENST00000482318 SPATA5Q8NB90 893 aa26.45■■□□□ 1.83
RUNX1-216ENST00000482318 APPBP2Q92624 585 aa26.45■■□□□ 1.83
RUNX1-216ENST00000482318 MAST3O60307 1309 aa26.45■■□□□ 1.82
RUNX1-216ENST00000482318 TSGA10IPQ3SY00 556 aa26.45■■□□□ 1.82
RUNX1-216ENST00000482318 POTEAQ6S8J7 498 aa26.45■■□□□ 1.82
RUNX1-216ENST00000482318 CCDC129Q6ZRS4 1044 aa26.45■■□□□ 1.82
RUNX1-216ENST00000482318 CHGBP05060 677 aa26.44■■□□□ 1.82
RUNX1-216ENST00000482318 CASTP20810 708 aaKnown RBP26.44■■□□□ 1.82
RUNX1-216ENST00000482318 KRT32Q14532 448 aa26.44■■□□□ 1.82
RUNX1-216ENST00000482318 NBR1Q14596 966 aa26.44■■□□□ 1.82
RUNX1-216ENST00000482318 WASHC4Q2M389 1173 aa26.44■■□□□ 1.82
RUNX1-216ENST00000482318 JAKMIP1Q96N16 626 aaKnown RBP26.44■■□□□ 1.82
RUNX1-216ENST00000482318 GNL3LQ9NVN8 582 aaKnown RBP26.44■■□□□ 1.82
RUNX1-216ENST00000482318 MYO5AQ9Y4I1 1855 aaKnown RBP26.43■■□□□ 1.82
RUNX1-216ENST00000482318 SNAP23O00161 211 aa26.43■■□□□ 1.82
RUNX1-216ENST00000482318 RASGRF1Q13972 1273 aa26.43■■□□□ 1.82
RUNX1-216ENST00000482318 ZNF827Q17R98 1081 aa26.43■■□□□ 1.82
RUNX1-216ENST00000482318 ZSWIM6Q9HCJ5 1215 aa26.43■■□□□ 1.82
RUNX1-216ENST00000482318 CYP46A1Q9Y6A2 500 aa26.43■■□□□ 1.82
RUNX1-216ENST00000482318 CAVIN4Q5BKX8 364 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 RPAP1Q9BWH6 1393 aaPredicted RBP26.42■■□□□ 1.82
RUNX1-216ENST00000482318 BCAMP50895 628 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 GRAPQ13588 217 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 NLGN1Q8N2Q7 840 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 GRAPLQ8TC17 118 aaPredicted RBP26.42■■□□□ 1.82
RUNX1-216ENST00000482318 TMX3Q96JJ7 454 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 TTC14Q96N46 770 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 CWC22Q9HCG8 908 aaKnown RBP26.42■■□□□ 1.82
RUNX1-216ENST00000482318 ZNF804BA4D1E1 1349 aa26.42■■□□□ 1.82
RUNX1-216ENST00000482318 ADD2P35612 726 aa26.41■■□□□ 1.82
RUNX1-216ENST00000482318 UBE3CQ15386 1083 aa26.41■■□□□ 1.82
RUNX1-216ENST00000482318 RPGRQ92834 1020 aaKnown RBP26.41■■□□□ 1.82
RUNX1-216ENST00000482318 OSBP2Q969R2 916 aa26.41■■□□□ 1.82
RUNX1-216ENST00000482318 IDH1O75874 414 aaKnown RBP26.4■■□□□ 1.82
RUNX1-216ENST00000482318 NFKBIBQ15653 356 aa26.4■■□□□ 1.82
RUNX1-216ENST00000482318 VPS53Q5VIR6 699 aa26.4■■□□□ 1.82
RUNX1-216ENST00000482318 RUFY3Q7L099 469 aa26.4■■□□□ 1.82
RUNX1-216ENST00000482318 PIH1D3Q9NQM4 214 aaKnown RBP26.4■■□□□ 1.82
RUNX1-216ENST00000482318 M0R2C6 588 aa26.39■■□□□ 1.82
RUNX1-216ENST00000482318 POLRMTO00411 1230 aaKnown RBP26.39■■□□□ 1.82
RUNX1-216ENST00000482318 ADCK5Q3MIX3 580 aa26.39■■□□□ 1.82
RUNX1-216ENST00000482318 CRY2Q49AN0 593 aa26.39■■□□□ 1.82
RUNX1-216ENST00000482318 SLC9C2Q5TAH2 1124 aa26.39■■□□□ 1.82
RUNX1-216ENST00000482318 HSPD1P10809 573 aaKnown RBP26.39■■□□□ 1.81
RUNX1-216ENST00000482318 MAP3K12Q12852 859 aa26.39■■□□□ 1.81
RUNX1-216ENST00000482318 SLFNL1Q499Z3 407 aa26.39■■□□□ 1.81
RUNX1-216ENST00000482318 DDR1Q08345 913 aa26.38■■□□□ 1.81
RUNX1-216ENST00000482318 FOXD4L1Q9NU39 408 aa26.38■■□□□ 1.81
RUNX1-216ENST00000482318 MYH13Q9UKX3 1938 aa26.38■■□□□ 1.81
RUNX1-216ENST00000482318 CUL4AQ13619 759 aa26.37■■□□□ 1.81
RUNX1-216ENST00000482318 VPS37DQ86XT2 251 aa26.37■■□□□ 1.81
RUNX1-216ENST00000482318 COL23A1Q86Y22 540 aaPredicted RBP26.37■■□□□ 1.81
RUNX1-216ENST00000482318 INTS4Q96HW7 963 aaKnown RBP26.37■■□□□ 1.81
RUNX1-216ENST00000482318 PDRG1Q9NUG6 133 aa26.37■■□□□ 1.81
RUNX1-216ENST00000482318 NRXN2Q9P2S2 1712 aa26.37■■□□□ 1.81
RUNX1-216ENST00000482318 SEMA3EO15041 775 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 BLOC1S2Q6QNY1 142 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 RBM17Q96I25 401 aaKnown RBP26.36■■□□□ 1.81
RUNX1-216ENST00000482318 CTNNA3Q9UI47 895 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 PDE6AP16499 860 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 AK2P54819 239 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 LIMCH1Q9UPQ0 1083 aa26.36■■□□□ 1.81
RUNX1-216ENST00000482318 GYG1P46976 350 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms